RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
RABGGTA-207ENST00000558936 FAM86C2PA6NEL3 165 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 ATF6P18850 670 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 GPR15P49685 360 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 DUSP4Q13115 394 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 DUOXA2Q1HG44 320 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 ZNF280DQ6N043 979 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 HS2ST1Q7LGA3 356 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 TMC8Q8IU68 726 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 LRRC52Q8N7C0 313 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 ZNF334Q9HCZ1 680 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 CRTAC1Q9NQ79 661 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 LIMD1Q9UGP4 676 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 AFF4Q9UHB7 1163 aaKnown RBP13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 DPP7Q9UHL4 492 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 INSL5Q9Y5Q6 135 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 CLUHO75153 1309 aa13.61□□□□□ -0.23
RABGGTA-207ENST00000558936 ZNF638Q14966 1978 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 BIN1O00499 593 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 KRT19P08727 400 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 POU2F2P09086 479 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 NR2F2P24468 414 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 HOXA9P31269 272 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 ANP32AP39687 249 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 CDH8P55286 799 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 UBE2HP62256 183 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 RBP5P82980 135 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 BFSP1Q12934 665 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 MYBPC2Q14324 1141 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 CAMK4Q16566 473 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 UVSSAQ2YD98 709 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 ZACNQ401N2 412 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 SPOPLQ6IQ16 392 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 TTI2Q6NXR4 508 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 USP34Q70CQ2 3546 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 SV2AQ7L0J3 742 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 SEMA4DQ92854 862 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 HPDLQ96IR7 371 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 ZSWIM3Q96MP5 696 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 DPEP3Q9H4B8 488 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 CYP4F11Q9HBI6 524 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 RAPGEFL1Q9UHV5 662 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 SNX9Q9Y5X1 595 aa13.6□□□□□ -0.23
RABGGTA-207ENST00000558936 DMDP11532 3685 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 COL4A2P08572 1712 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 H7C4K7 107 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 DCXO43602 365 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 TMEM191BP0C7N4 346 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 ODC1P11926 461 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 GJA1P17302 382 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 TNNI1P19237 187 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 TWF1Q12792 350 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 SV2CQ496J9 727 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 PPM1LQ5SGD2 360 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 CEP135Q66GS9 1140 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 TPGS2Q68CL5 300 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 FAM171BQ6P995 826 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 CYP26C1Q6V0L0 522 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 ZDHHC14Q8IZN3 488 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 TAS1R2Q8TE23 839 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 SMARCE1Q969G3 411 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 ASIC4Q96FT7 647 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 PI4K2AQ9BTU6 479 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 IL21Q9HBE4 155 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 USTQ9Y2C2 406 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 YIPF1Q9Y548 306 aa13.59□□□□□ -0.23
RABGGTA-207ENST00000558936 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 OR6C75A6NL08 312 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 MAPK13O15264 365 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 NARSO43776 548 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 STAU1O95793 577 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 PDGFBP01127 241 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 RHOP08100 348 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 HNRNPA1P09651 372 aaKnown RBP eCLIP13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 ALADP13716 330 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 CEBPBP17676 345 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 RAP1GAPP47736 663 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 EPHA5P54756 1037 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 ADAM9Q13443 819 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 SURF1Q15526 300 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 EDRF1Q3B7T1 1238 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 SLC39A12Q504Y0 691 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 SDHAF4Q5VUM1 108 aa13.58□□□□□ -0.24
RABGGTA-207ENST00000558936 ELMSAN1Q6PJG2 1045 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms