RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PASD1Q8IV76 773 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 HDAC7Q8WUI4 952 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 HNRNPLLQ8WVV9 542 aaKnown RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 PPP1R12CQ9BZL4 782 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 TRIM7Q9C029 511 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 NXF3Q9H4D5 531 aaKnown RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 SMYD3Q9H7B4 428 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 SNTG2Q9NY99 539 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 FAM53CQ9NYF3 392 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 CNOT8Q9UFF9 292 aaKnown RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 NOC2LQ9Y3T9 749 aaKnown RBP13.8□□□□□ -0.2
SMAD3-207ENST00000558763 HES2Q9Y543 173 aa13.8□□□□□ -0.2
SMAD3-207ENST00000558763 THAP12O43422 761 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 STAU1O95793 577 aaKnown RBP13.79□□□□□ -0.2
SMAD3-207ENST00000558763 KRT19P08727 400 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 GHRP10912 638 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
SMAD3-207ENST00000558763 POLR2BP30876 1174 aaKnown RBP13.79□□□□□ -0.2
SMAD3-207ENST00000558763 PAFAH1B1P43034 410 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 UBE2Q1Q7Z7E8 422 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 FAM228AQ86W67 206 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 PHF13Q86YI8 300 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-207ENST00000558763 KRT35Q92764 455 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 TOX2Q96NM4 488 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 TWNKQ96RR1 684 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
SMAD3-207ENST00000558763 HMGXB4Q9UGU5 601 aa13.79□□□□□ -0.2
SMAD3-207ENST00000558763 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
SMAD3-207ENST00000558763 CAND2O75155 1236 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 SASH3O75995 380 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 ATICP31939 592 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CDH5P33151 784 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PEX5P50542 639 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CDH8P55286 799 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 BFSP2Q13515 415 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 ZNF394Q53GI3 561 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 BEND6Q5SZJ8 279 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 TRAF7Q6Q0C0 670 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 LRRC8DQ7L1W4 858 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CARD9Q9H257 536 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PDCL3Q9H2J4 239 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 HIPK3Q9H422 1215 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PLEKHA5Q9HAU0 1116 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 ITGA11Q9UKX5 1188 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 TTC7AQ9ULT0 858 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PCDHGC3Q9UN70 934 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 TCRBV5S1A1TA0A578 114 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PPEF2O14830 753 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CEP104O60308 925 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CLSTN1O94985 981 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CLTBP09497 229 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 MYBL1P10243 752 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 MYBL2P10244 700 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 SELPP16109 830 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 COMTP21964 271 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 AXLP30530 894 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 NSFP46459 744 aaKnown RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 RAD23BP54727 409 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 RNASE9P60153 205 aaKnown RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 LPIN1Q14693 890 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 MBTPS1Q14703 1052 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 FAM26DQ5JW98 314 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 FBXO47Q5MNV8 452 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 TMCO3Q6UWJ1 677 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CD302Q8IX05 232 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 WDTC1Q8N5D0 677 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.78□□□□□ -0.27e-13■□□□□ 11.2
SMAD3-207ENST00000558763 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PRDM5Q9NQX1 630 aaPredicted RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 DPP3Q9NY33 737 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CNTN3Q9P232 1028 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 PIN4Q9Y237 131 aaKnown RBP13.78□□□□□ -0.2
SMAD3-207ENST00000558763 TANC1Q9C0D5 1861 aa13.78□□□□□ -0.2
SMAD3-207ENST00000558763 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 PGRMC1O00264 195 aaKnown RBP13.77□□□□□ -0.21
SMAD3-207ENST00000558763 RRP9O43818 475 aaKnown RBP13.77□□□□□ -0.21
SMAD3-207ENST00000558763 CILPO75339 1184 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 RECQL4O94761 1208 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 MMP8P22894 467 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 CD52P31358 61 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 CCL23P55773 120 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 MRPS25P82663 173 aaKnown RBP13.77□□□□□ -0.21
SMAD3-207ENST00000558763 INCA1Q0VD86 236 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 MESDQ14696 234 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 XKR4Q5GH76 650 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 PLEKHA7Q6IQ23 1121 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 SLC4A11Q8NBS3 891 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
SMAD3-207ENST00000558763 HPDLQ96IR7 371 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms