RNA–Protein interactions for RNA: ENST00000558528.1

LDLR-209, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-209ENST00000558528 KCNMB3Q9NPA1 279 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 PXMP2Q9NR77 195 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 DISC1Q9NRI5 854 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 SPTLC3Q9NUV7 552 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 CYP39A1Q9NYL5 469 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 MORF4L1Q9UBU8 362 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 GTF2IRD1Q9UHL9 959 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 FZD1Q9UP38 647 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 DNM3Q9UQ16 869 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 FAM50BQ9Y247 325 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 UBIAD1Q9Y5Z9 338 aa5.63□□□□□ -1.51
LDLR-209ENST00000558528 ECM29Q5VYK3 1845 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PKD1L2Q7Z442 2459 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PVALEFA0A1B0GWK0 134 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 BECN2A8MW95 431 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 WDR64B1ANS9 1081 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 BTBD19C9JJ37 291 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 GOLGA6L19H0YKK7 550 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 NFIBO00712 420 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 WNT9AO14904 365 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MSH4O15457 936 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MEFVO15553 781 aaPredicted RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 XPOTO43592 962 aaKnown RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 HOXC6P09630 235 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 ATP2A2P16615 1042 aaKnown RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 GRK2P25098 689 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 RPA1P27694 616 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 SERPINB3P29508 390 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MAP2K3P46734 347 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 JAK3P52333 1124 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 NLRP12P59046 1061 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PHC1P78364 1004 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 KRT76Q01546 638 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 KCNAB2Q13303 367 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PPP2R5CQ13362 524 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 STIM1Q13586 685 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 NEDD9Q14511 834 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 ARHGEF6Q15052 776 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PGM5Q15124 567 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 EPHA7Q15375 998 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PDCD2Q16342 344 aaPredicted RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 CAMK4Q16566 473 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 NKG7Q16617 165 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 FAM110CQ1W6H9 321 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 KIZQ2M2Z5 673 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 SLC9C1Q4G0N8 1177 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MUM1L1Q5H9M0 696 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 HYIQ5T013 277 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 NT5DC1Q5TFE4 455 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 LRCH2Q5VUJ6 765 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 TXNDC11Q6PKC3 985 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MOB2Q70IA6 237 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 SRLQ86TD4 932 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 CRIPAKQ8N1N5 446 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MSL3Q8N5Y2 521 aaKnown RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 CD99L2Q8TCZ2 262 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 TBC1D5Q92609 795 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 VWCEQ96DN2 955 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 KLHDC7BQ96G42 594 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PAGE5Q96GU1 130 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 EPSTI1Q96J88 318 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 LRGUKQ96M69 825 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 FANCD2OSQ96PS1 177 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 NACC1Q96RE7 527 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 TAAR1Q96RJ0 339 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MMP19Q99542 508 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 MOV10L1Q9BXT6 1211 aaKnown RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 GOLPH3LQ9H4A5 285 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 PIDD1Q9HB75 910 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 A1CFQ9NQ94 594 aaKnown RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 KCND2Q9NZV8 630 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 RBPJLQ9UBG7 517 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 TUBE1Q9UJT0 475 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 RIPK3Q9Y572 518 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 ST14Q9Y5Y6 855 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 FRMPD4Q14CM0 1322 aa5.62□□□□□ -1.51
LDLR-209ENST00000558528 GREB1LQ9C091 1923 aaPredicted RBP5.62□□□□□ -1.51
LDLR-209ENST00000558528 IGLV3-22A0A075B6J6 115 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 FAM187AA6NFU0 413 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 FAM86B1E9PN63 330 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 IPO5O00410 1097 aaKnown RBP5.61□□□□□ -1.51
LDLR-209ENST00000558528 SLC37A4O43826 429 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 LILRB5O75023 590 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 PSMD10O75832 226 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 NFASCO94856 1347 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 FGFR1OPO95684 399 aaKnown RBP5.61□□□□□ -1.51
LDLR-209ENST00000558528 FAM86B2P0C5J1 330 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 MYCLP12524 364 aaPredicted RBP5.61□□□□□ -1.51
LDLR-209ENST00000558528 ICAM3P32942 547 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 LSP1P33241 339 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 ABCD1P33897 745 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 LTBRP36941 435 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 CCT6AP40227 531 aaKnown RBP5.61□□□□□ -1.51
LDLR-209ENST00000558528 FAM193AP78312 1265 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 MOGSQ13724 837 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 LRRC32Q14392 662 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 KCNB1Q14721 858 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 PPP2R5DQ14738 602 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 SPECC1Q5M775 1068 aa5.61□□□□□ -1.51
LDLR-209ENST00000558528 B3GNT9Q6UX72 402 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms