RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TAF6LQ9Y6J9 622 aa6.9□□□□□ -1.3
ZEB1-211ENST00000558440 FSD2A1L4K1 749 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 M0QZ92 97 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 RPLP2P05387 115 aaKnown RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 SRGAP2BP0DMP2 458 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 GUCY2CP25092 1073 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 DNAJB1P25685 340 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 TCF7P36402 384 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 ERVFRD-1P60508 538 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 MRPS6P82932 125 aaKnown RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 MRPS9P82933 396 aaKnown RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 MGAT3Q09327 533 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 CAMK1Q14012 370 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 PAN2Q504Q3 1202 aaKnown RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 FBXO47Q5MNV8 452 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 SPOUT1Q5T280 376 aaKnown RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 TDRD10Q5VZ19 366 aaKnown RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 LILRA6Q6PI73 481 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 SPPL3Q8TCT6 385 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 DNAJB3Q8WWF6 145 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 CUL5Q93034 780 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 INPP4AQ96PE3 977 aaPredicted RBP6.89□□□□□ -1.31
ZEB1-211ENST00000558440 PIGSQ96S52 555 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 SENP7Q9BQF6 1050 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 DSCC1Q9BVC3 393 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 FTHL17Q9BXU8 183 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 TLE6Q9H808 572 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 DIAPH3Q9NSV4 1193 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 AP5S1Q9NUS5 200 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 ERAP1Q9NZ08 941 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 RTEL1Q9NZ71 1219 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 MAD2L2Q9UI95 211 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 CDY2AQ9Y6F7 541 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 FRMPD4Q14CM0 1322 aa6.89□□□□□ -1.31
ZEB1-211ENST00000558440 CACNA1BQ00975 2339 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 SCAMP3O14828 347 aaKnown RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 GLP2RO95838 553 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 SCG2P13521 617 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 ATF7P17544 494 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 SDSP20132 328 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 IBSPP21815 317 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 MARK3P27448 753 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 AVPR2P30518 371 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 CD52P31358 61 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 VCPP55072 806 aaKnown RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 IGBP1P78318 339 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 SRSF3P84103 164 aaKnown RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 PAK2Q13177 524 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 PTPN21Q16825 1174 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 ANKRD39Q53RE8 183 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 RTP2Q5QGT7 225 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 FBXW10Q5XX13 1052 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 XRRA1Q6P2D8 792 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 CWC27Q6UX04 472 aaKnown RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 LSRQ86X29 649 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 SMARCC2Q8TAQ2 1214 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 GLG1Q92896 1179 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 CDHR1Q96JP9 859 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 NEK1Q96PY6 1258 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 FAM49AQ9H0Q0 323 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 TLR9Q9NR96 1032 aa6.88□□□□□ -1.31
ZEB1-211ENST00000558440 MBD1Q9UIS9 605 aaPredicted RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 CNOT6Q9ULM6 557 aaKnown RBP6.88□□□□□ -1.31
ZEB1-211ENST00000558440 CEP250Q9BV73 2442 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 ERICH2A1L162 156 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 MBLAC1A4D2B0 266 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 RRN3P2A6NIE6 340 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 H0Y858 1186 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 HIP1O00291 1037 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 PER2O15055 1255 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 SDHBP21912 280 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 VIPR1P32241 457 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 YBX1P67809 324 aaKnown RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 UBE3AQ05086 875 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 TRDNQ13061 729 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 LAPTM5Q13571 262 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 COL9A2Q14055 689 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 GRM4Q14833 912 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 KIR3DS1Q14943 382 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 SEC23AQ15436 765 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 AXDND1Q5T1B0 1012 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 THNSL1Q8IYQ7 743 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 TMEM52Q8NDY8 209 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 PIBF1Q8WXW3 757 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 SEPT1Q8WYJ6 367 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 TNPO1Q92973 898 aaKnown RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 CDCA3Q99618 268 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 SMARCAD1Q9H4L7 1026 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 RIOX1Q9H6W3 641 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 AGO3Q9H9G7 860 aaKnown RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 GP6Q9HCN6 339 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 TELO2Q9Y4R8 837 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 TRPV2Q9Y5S1 764 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 SQORQ9Y6N5 450 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 DNAH14Q0VDD8 3507 aa6.87□□□□□ -1.31
ZEB1-211ENST00000558440 TPRP12270 2363 aaKnown RBP6.87□□□□□ -1.31
ZEB1-211ENST00000558440 EPG5Q9HCE0 2579 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 GSTTP1A0A1W2PQM5 241 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms