RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 SHKBP1Q8TBC3 707 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 FAM200AQ8TCP9 573 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 ZSWIM3Q96MP5 696 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 ZCWPW1Q9H0M4 648 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 SLITRK6Q9H5Y7 841 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
HERC1-202ENST00000558324 A0A1W2PRU2 124 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 MOSPD3O75425 235 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 ECI2O75521 394 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 TMEM191BP0C7N4 346 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 FCARP24071 287 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 HOXD13P35453 343 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 MLF2Q15773 248 aaPredicted RBP12.85□□□□□ -0.35
HERC1-202ENST00000558324 CSGALNACT2Q8N6G5 542 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 LEMD2Q8NC56 503 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 ZSCAN18Q8TBC5 510 aaPredicted RBP12.85□□□□□ -0.35
HERC1-202ENST00000558324 CACTINQ8WUQ7 758 aaKnown RBP12.85□□□□□ -0.35
HERC1-202ENST00000558324 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 ASB16Q96NS5 453 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 IRF2BPLQ9H1B7 796 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 ZFP14Q9HCL3 533 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 ABI2Q9NYB9 513 aaPredicted RBP12.85□□□□□ -0.35
HERC1-202ENST00000558324 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 PTPRJQ12913 1337 aa12.85□□□□□ -0.35
HERC1-202ENST00000558324 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
HERC1-202ENST00000558324 LRRN2O75325 713 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 CD72P21854 359 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 ACAT1P24752 427 aaKnown RBP12.84□□□□□ -0.35
HERC1-202ENST00000558324 PNPLA4P41247 253 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 VIPR2P41587 438 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 CYP2J2P51589 502 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 EPHA5P54756 1037 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 PFKPQ01813 784 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 CUL4BQ13620 913 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 UBXN2BQ14CS0 331 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 ANGPT1Q15389 498 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 STXBP5Q5T5C0 1151 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 ATL3Q6DD88 541 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 PHLDB3Q6NSJ2 640 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 UNC13DQ70J99 1090 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 EPM2AIP1Q7L775 607 aaPredicted RBP12.84□□□□□ -0.35
HERC1-202ENST00000558324 LRRTM3Q86VH5 581 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 TMC8Q8IU68 726 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 CEP57L1Q8IYX8 460 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 PJA1Q8NG27 643 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 SMARCD2Q92925 531 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 ELSPBP1Q96BH3 223 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 SHDQ96IW2 340 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 ZNF334Q9HCZ1 680 aaPredicted RBP12.84□□□□□ -0.35
HERC1-202ENST00000558324 SLC39A2Q9NP94 309 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 SIT1Q9Y3P8 196 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 SCN1AP35498 2009 aa12.84□□□□□ -0.35
HERC1-202ENST00000558324 ZNF233A6NK53 670 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 KIAA0391O15091 583 aaKnown RBP12.83□□□□□ -0.36
HERC1-202ENST00000558324 CLIC2O15247 247 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 MICAL2O94851 1124 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 TNNC2P02585 160 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 ATF6P18850 670 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 STARD6P59095 220 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 RBP5P82980 135 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 VEPH1Q14D04 833 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 VITQ6UXI7 678 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 TPRG1Q6ZUI0 275 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 DNAJB7Q7Z6W7 309 aaPredicted RBP12.83□□□□□ -0.36
HERC1-202ENST00000558324 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 LRRC52Q8N7C0 313 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 ZNF507Q8TCN5 953 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 GIPC2Q8TF65 315 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 SCFD1Q8WVM8 642 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 LRRC3Q9BY71 257 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 BRD9Q9H8M2 597 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 HEBP1Q9NRV9 189 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 AGPAT3Q9NRZ7 376 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 SIX4Q9UIU6 781 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 RCOR1Q9UKL0 485 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 R3HCC1Q9Y3T6 440 aaKnown RBP12.83□□□□□ -0.36
HERC1-202ENST00000558324 SNX9Q9Y5X1 595 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 NCANO14594 1321 aa12.83□□□□□ -0.36
HERC1-202ENST00000558324 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 KANSL1LA0AUZ9 987 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 TGFB1I1O43294 461 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 HCRTO43612 131 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 GFRA3O60609 400 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 HUS1O60921 280 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms