RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 BICD1Q96G01 975 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 TSPAN18Q96SJ8 248 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 PPP1R16BQ96T49 567 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 MMS19Q96T76 1030 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 C7orf25Q9BPX7 421 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 ZBED2Q9BTP6 218 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 MRPL4Q9BYD3 311 aaKnown RBP8.56□□□□□ -1.04
RTF1-205ENST00000558298 LMAN2LQ9H0V9 348 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 THAP9Q9H5L6 903 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 PDZD7Q9H5P4 517 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 CERS4Q9HA82 394 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 CD248Q9HCU0 757 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 PRDM6Q9NQX0 595 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
RTF1-205ENST00000558298 GIT1Q9Y2X7 761 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 PCDHB2Q9Y5E7 798 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 STYXL1Q9Y6J8 313 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 TTC28Q96AY4 2481 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 ATP8B3O60423 1300 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 A0A087WWV3 80 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 PVALEFA0A1B0GWK0 134 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 BICDL2A1A5D9 508 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 ENO4A6NNW6 628 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 LGALS16A8MUM7 142 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 K7ERI5 159 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 EIF3DO15371 548 aaKnown RBP eCLIP8.55□□□□□ -1.04
RTF1-205ENST00000558298 ATP5HO75947 161 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 FAM13AO94988 1023 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 ATP6V1G2O95670 118 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 FGFR1OPO95684 399 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 GSTA2P09210 222 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 MCF2P10911 925 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 LAG3P18627 525 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 PPM1AP35813 382 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 HSPA9P38646 679 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 SKIV2L2P42285 1042 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 SCTRP47872 440 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 COPB1P53618 953 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 SNRPFP62306 86 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 MCL1Q07820 350 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 PAK1Q13153 545 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 PDCLQ13371 301 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 CAMK1Q14012 370 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 KYAT1Q16773 422 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 BMT2Q1RMZ1 405 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 XKR4Q5GH76 650 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 TCP11X2Q5H9J9 407 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 CLLU1OSQ5K130 101 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 SH2D4BQ5SQS7 431 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 NAIF1Q69YI7 327 aaPredicted RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 GLB1LQ6UWU2 654 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 AGMOQ6ZNB7 445 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 UNC13DQ70J99 1090 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 ZNF720Q7Z2F6 126 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 FAM178BQ8IXR5 827 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 TMEM192Q8IY95 271 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 GPR65Q8IYL9 337 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 ARHGAP18Q8N392 663 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 CCDC197Q8NCU1 140 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 SMG8Q8ND04 991 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 CALR3Q96L12 384 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 CASD1Q96PB1 797 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 ACO2Q99798 780 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 ADPGKQ9BRR6 497 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 C11orf84Q9BUA3 381 aaPredicted RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 IRX2Q9BZI1 471 aaPredicted RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 VCXQ9H320 206 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 GDF3Q9NR23 364 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 SAMD15Q9P1V8 674 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 KANSL3Q9P2N6 904 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 LRFN2Q9ULH4 789 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 LZTS1Q9Y250 596 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 IPPQ9Y573 584 aa8.55□□□□□ -1.04
RTF1-205ENST00000558298 MRPL42Q9Y6G3 142 aaKnown RBP8.55□□□□□ -1.04
RTF1-205ENST00000558298 ANKRD65E5RJM6 399 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 KIAA0391O15091 583 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 POLR2DO15514 142 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 B4GALT5O43286 388 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 FAM189A1O60320 539 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 CSDE1O75534 798 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 UPP2O95045 317 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 RTN3O95197 1032 aaPredicted RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 EFEMP2O95967 443 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 LMNAP02545 664 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 EDN1P05305 212 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 SSBP05455 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
RTF1-205ENST00000558298 ADRB2P07550 413 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 MYBL2P10244 700 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 ALADP13716 330 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 FGFR4P22455 802 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 PAX7P23759 505 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 HNRNPH3P31942 346 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 BMPR1AP36894 532 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 GRM5P41594 1212 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 GATMP50440 423 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 RPS6KA3P51812 740 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 ATP11AP98196 1134 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 PLCB3Q01970 1234 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms