RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.2□□□□□ -0.62
TPM1-210ENST00000558264 B4GALT4O60513 344 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 PPFIA2O75334 1257 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 CETPP11597 493 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 POLR2BP30876 1174 aaKnown RBP11.2□□□□□ -0.62
TPM1-210ENST00000558264 AP3M2P53677 418 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 C1QBPQ07021 282 aaKnown RBP11.2□□□□□ -0.62
TPM1-210ENST00000558264 SLC29A2Q14542 456 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 CLUL1Q15846 466 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 SMTNL2Q2TAL5 461 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 ZNF667Q5HYK9 610 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 FAM182AQ5T1J6 154 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 MTHFD1LQ6UB35 978 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.2□□□□□ -0.62
TPM1-210ENST00000558264 RHOT1Q8IXI2 618 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 EMC1Q8N766 993 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 PPTC7Q8NI37 304 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 NPLOC4Q8TAT6 608 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 PTPN18Q99952 460 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 TXLNGYQ9BZA5 131 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 KATNBL1Q9H079 304 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 FAM107BQ9H098 131 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 CALCOCO1Q9P1Z2 691 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 PASKQ96RG2 1323 aa11.2□□□□□ -0.62
TPM1-210ENST00000558264 BRCA2P51587 3418 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 CEP350Q5VT06 3117 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 SHOX2O60902 331 aaPredicted RBP11.19□□□□□ -0.62
TPM1-210ENST00000558264 ERLIN2O94905 339 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 KRT1P04264 644 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 CHKAP35790 457 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 SLC1A1P43005 524 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 MTMR3Q13615 1198 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 SLC10A6Q3KNW5 377 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 PTPN20Q4JDL3 420 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 ZNF484Q5JVG2 852 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 LRIG3Q6UXM1 1119 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 ERICH1Q86X53 443 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 EXOC8Q8IYI6 725 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 TMEM35BQ8NCS4 154 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 OR6J1Q8NGC5 347 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 BCAS4Q8TDM0 211 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 PLVAPQ9BX97 442 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 LRRC19Q9H756 370 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 PRMT7Q9NVM4 692 aaPredicted RBP11.19□□□□□ -0.62
TPM1-210ENST00000558264 CPA4Q9UI42 421 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 HES2Q9Y543 173 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 PPME1Q9Y570 386 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 SCINQ9Y6U3 715 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 PODXLO00592 558 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 CAND2O75155 1236 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 CCT5P48643 541 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 SEC24CP53992 1094 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
TPM1-210ENST00000558264 GRM1Q13255 1194 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 GRIK4Q16099 956 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 KCNT1Q5JUK3 1230 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 JOSD2Q8TAC2 188 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 MAML3Q96JK9 1138 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 DDX23Q9BUQ8 820 aaKnown RBP11.19□□□□□ -0.62
TPM1-210ENST00000558264 OSBPL8Q9BZF1 889 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 DCLK3Q9C098 648 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 VTA1Q9NP79 307 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 AGAP1Q9UPQ3 857 aa11.19□□□□□ -0.62
TPM1-210ENST00000558264 IQCA1LA6NCM1 817 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 TMEM191CA6NGB0 347 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 HMGB1P1B2RPK0 211 aaPredicted RBP11.18□□□□□ -0.62
TPM1-210ENST00000558264 PLXNB2O15031 1838 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 EIF3HO15372 352 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPM1-210ENST00000558264 CELF2O95319 508 aaKnown RBP11.18□□□□□ -0.62
TPM1-210ENST00000558264 FNTAP49354 379 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 GTF2A2P52657 109 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 RAD23BP54727 409 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 SURF1Q15526 300 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 GLRA4Q5JXX5 417 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 MARCH8Q5T0T0 291 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 DENND2CQ68D51 928 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 MFSD7Q6UXD7 560 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 KDM7AQ6ZMT4 941 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 UBA3Q8TBC4 463 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 ELOVL4Q9GZR5 314 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 ZWILCHQ9H900 591 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 PLXNA1Q9UIW2 1896 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 TP73O15350 636 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 ASAP2O43150 1006 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 TSPAN1O60635 241 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 ACSL3O95573 720 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 MMP3P08254 477 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 RFC1P35251 1148 aaPredicted RBP11.18□□□□□ -0.62
TPM1-210ENST00000558264 DYNLT1P63172 113 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 CALCOCO2Q13137 446 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 C12orf50Q8NA57 414 aaPredicted RBP11.18□□□□□ -0.62
TPM1-210ENST00000558264 GLIS1Q8NBF1 620 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 EPS8L3Q8TE67 593 aaKnown RBP11.18□□□□□ -0.62
TPM1-210ENST00000558264 RAPGEF5Q92565 580 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 VCPIP1Q96JH7 1222 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 CPXM1Q96SM3 734 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
TPM1-210ENST00000558264 SYNCQ9H7C4 482 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms