RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 L1RE1Q9UN81 338 aa12.91□□□□□ -0.34
CDK12-203ENST00000558240 VCANP13611 3396 aa12.91□□□□□ -0.34
CDK12-203ENST00000558240 WDR27A2RRH5 827 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 GABRDO14764 452 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 PMM2O15305 246 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 TACC1O75410 805 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 PAPLNO95428 1278 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 ASS1P00966 412 aaKnown RBP12.9□□□□□ -0.34
CDK12-203ENST00000558240 HLA-DRAP01903 254 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 P4HA1P13674 534 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 ATF2P15336 505 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 PIK3CAP42336 1068 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 MXI1P50539 228 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 TNNC1P63316 161 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 MYL7Q01449 175 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 ITIH3Q06033 890 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 GPR17Q13304 367 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 STX1AQ16623 288 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 TPD52L1Q16890 204 aaPredicted RBP12.9□□□□□ -0.34
CDK12-203ENST00000558240 ZNF699Q32M78 642 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 DCAF17Q5H9S7 520 aaPredicted RBP12.9□□□□□ -0.34
CDK12-203ENST00000558240 ZNF667Q5HYK9 610 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 TRIM59Q8IWR1 403 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDK12-203ENST00000558240 ADGRF2Q8IZF7 708 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 SMRP1Q8NCR6 262 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 CMASQ8NFW8 434 aaPredicted RBP12.9□□□□□ -0.34
CDK12-203ENST00000558240 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.9□□□□□ -0.34
CDK12-203ENST00000558240 TAS1R2Q8TE23 839 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 MMS19Q96T76 1030 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 ACBD6Q9BR61 282 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 RHOBTB2Q9BYZ6 727 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 S1PR5Q9H228 398 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 THAP9Q9H5L6 903 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 MMRN2Q9H8L6 949 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 SFXN1Q9H9B4 322 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 AFF4Q9UHB7 1163 aaKnown RBP12.9□□□□□ -0.34
CDK12-203ENST00000558240 COQ4Q9Y3A0 265 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 MYH10P35580 1976 aa12.9□□□□□ -0.34
CDK12-203ENST00000558240 P4HA2O15460 535 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 N4BP1O75113 896 aaKnown RBP12.89□□□□□ -0.35
CDK12-203ENST00000558240 SPATA31D3P0C874 917 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 CPB1P15086 417 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 WARSP23381 471 aaKnown RBP12.89□□□□□ -0.35
CDK12-203ENST00000558240 ELF1P32519 619 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 ARPP19P56211 112 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 SMARCB1Q12824 385 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
CDK12-203ENST00000558240 CBWD6Q4V339 395 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 CBWD3Q5JTY5 395 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 CBWD5Q5RIA9 395 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 LIN9Q5TKA1 542 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 CES5AQ6NT32 575 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 CYP26C1Q6V0L0 522 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 SPATA31D4Q6ZUB0 917 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 FAM114A1Q8IWE2 563 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 CCDC150Q8NCX0 1101 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 FBXL13Q8NEE6 735 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 OR10T2Q8NGX3 314 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 ENOX1Q8TC92 643 aaKnown RBP12.89□□□□□ -0.35
CDK12-203ENST00000558240 KBTBD7Q8WVZ9 684 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 FAXDC2Q96IV6 333 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 ASB2Q96Q27 587 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 IMPG2Q9BZV3 1241 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 RAB20Q9NX57 234 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 ZDHHC7Q9NXF8 308 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 DDX43Q9NXZ2 648 aaKnown RBP12.89□□□□□ -0.35
CDK12-203ENST00000558240 NXF1Q9UBU9 619 aaKnown RBP12.89□□□□□ -0.35
CDK12-203ENST00000558240 FAM50BQ9Y247 325 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDK12-203ENST00000558240 PTPRDP23468 1912 aa12.89□□□□□ -0.35
CDK12-203ENST00000558240 CCDC195A0A1B0GUA6 201 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 MBTPS2O43462 519 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 ZMYND10O75800 440 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 PCSK1P29120 753 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 HOXA9P31269 272 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 GNL1P36915 607 aaPredicted RBP12.88□□□□□ -0.35
CDK12-203ENST00000558240 FMO5P49326 533 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 TSPY1Q01534 308 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 TYRO3Q06418 890 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 KCNH2Q12809 1159 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 CLUL1Q15846 466 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
CDK12-203ENST00000558240 RNF19BQ6ZMZ0 732 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 CCDC149Q6ZUS6 474 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 TCEAL8Q8IYN2 117 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 DCP1BQ8IZD4 617 aaKnown RBP12.88□□□□□ -0.35
CDK12-203ENST00000558240 C12orf76Q8N812 135 aaPredicted RBP12.88□□□□□ -0.35
CDK12-203ENST00000558240 C2orf15Q8WU43 125 aaKnown RBP12.88□□□□□ -0.35
CDK12-203ENST00000558240 CNOT6LQ96LI5 555 aaKnown RBP12.88□□□□□ -0.35
CDK12-203ENST00000558240 HSFX1Q9UBD0 423 aa12.88□□□□□ -0.35
CDK12-203ENST00000558240 RFPL2O75678 378 aa12.87□□□□□ -0.35
CDK12-203ENST00000558240 CLSTN1O94985 981 aa12.87□□□□□ -0.35
CDK12-203ENST00000558240 AFPP02771 609 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms