RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ADGRF2Q8IZF7 708 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 PDCL2Q8N4E4 241 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 RNF214Q8ND24 703 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 TATDN2Q93075 761 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 JAKMIP2Q96AA8 810 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 B3GALT6Q96L58 329 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 KLHL5Q96PQ7 755 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 CDCA3Q99618 268 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 CDX2Q99626 313 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 ACBD6Q9BR61 282 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 CRACR2AQ9BSW2 395 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 BCO2Q9BYV7 579 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 INTS2Q9H0H0 1204 aaKnown RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 SNX25Q9H3E2 840 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 APOBEC3GQ9HC16 384 aaKnown RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 TIMM13Q9Y5L4 95 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-204ENST00000558172 MTCH2Q9Y6C9 303 aa11.21□□□□□ -0.61
LRRC28-204ENST00000558172 PLXNA3P51805 1871 aa11.21□□□□□ -0.62
LRRC28-204ENST00000558172 A0A1B0GTH6 734 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 HIDE1A8MVS5 230 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 NCK2O43639 380 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 TBC1D4O60343 1298 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 LRRN2O75325 713 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 TPM3P06753 285 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 ADH1AP07327 375 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 SLC9A1P19634 815 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 IGFBP4P22692 258 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 PON1P27169 355 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 PCSK1P29120 753 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 GNL1P36915 607 aaPredicted RBP11.2□□□□□ -0.62
LRRC28-204ENST00000558172 ASPAP45381 313 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 UBASH3AP57075 661 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 GCNT1Q02742 428 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 UBXN1Q04323 297 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 SMARCB1Q12824 385 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 LRMPQ12912 555 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 CUL2Q13617 745 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 ADGRE1Q14246 886 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 SLC8B1Q6J4K2 584 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 TRIM65Q6PJ69 517 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 PRSS55Q6UWB4 352 aaPredicted RBP11.2□□□□□ -0.62
LRRC28-204ENST00000558172 Q7L0L9 218 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 ENOSF1Q7L5Y1 443 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 UNC93AQ86WB7 457 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 OR6B3Q8NGW1 331 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 KBTBD7Q8WVZ9 684 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 AUTS2Q8WXX7 1259 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 ERGIC2Q96RQ1 377 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 CLSTN3Q9BQT9 956 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 DDX43Q9NXZ2 648 aaKnown RBP11.2□□□□□ -0.62
LRRC28-204ENST00000558172 FBXL5Q9UKA1 691 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 POLIQ9UNA4 740 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 STXBP5LQ9Y2K9 1186 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 DAAM1Q9Y4D1 1078 aa11.2□□□□□ -0.62
LRRC28-204ENST00000558172 PTPRDP23468 1912 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 A0A1W2PQC6 194 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 A8MXQ7 604 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 TEX28O15482 410 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 CBFA2T2O43439 604 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 CNPP09543 421 aaKnown RBP11.19□□□□□ -0.62
LRRC28-204ENST00000558172 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 RFX1P22670 979 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 KLRC2P26717 231 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 OR1D2P34982 312 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 MFAP3P55082 362 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 CDH8P55286 799 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 TSPY1Q01534 308 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 INCA1Q0VD86 236 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 RAB33AQ14088 237 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 NR1I3Q14994 352 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 MAPRE1Q15691 268 aaKnown RBP11.19□□□□□ -0.62
LRRC28-204ENST00000558172 UVSSAQ2YD98 709 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 PHLDB3Q6NSJ2 640 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 SCARA5Q6ZMJ2 495 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 DCP1BQ8IZD4 617 aaKnown RBP11.19□□□□□ -0.62
LRRC28-204ENST00000558172 PPM1KQ8N3J5 372 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 MYLIPQ8WY64 445 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 TNIP3Q96KP6 325 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 MRPL45Q9BRJ2 306 aaKnown RBP11.19□□□□□ -0.62
LRRC28-204ENST00000558172 RBSNQ9H1K0 784 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 SMYD3Q9H7B4 428 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 TLE6Q9H808 572 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 UBE2TQ9NPD8 197 aaPredicted RBP11.19□□□□□ -0.62
LRRC28-204ENST00000558172 PLCB1Q9NQ66 1216 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.19□□□□□ -0.627e-8■■■■■ 186.3
LRRC28-204ENST00000558172 APEX2Q9UBZ4 518 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 DPP7Q9UHL4 492 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 CDH9Q9ULB4 789 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 MAFFQ9ULX9 164 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 BARX2Q9UMQ3 279 aaPredicted RBP11.19□□□□□ -0.62
LRRC28-204ENST00000558172 CDY1Q9Y6F8 540 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 CDH23Q9H251 3354 aa11.19□□□□□ -0.62
LRRC28-204ENST00000558172 SZT2Q5T011 3432 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 BRWD1Q9NSI6 2320 aa11.18□□□□□ -0.62
LRRC28-204ENST00000558172 CLASP2O75122 1294 aaKnown RBP11.18□□□□□ -0.62
LRRC28-204ENST00000558172 CSPG5O95196 566 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms