RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 UAP1L1Q3KQV9 507 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 FBXO43Q4G163 708 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 USP39Q53GS9 565 aaKnown RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 TMEM196Q5HYL7 178 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 WDR44Q5JSH3 913 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 C6orf132Q5T0Z8 1188 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 GPR158Q5T848 1215 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 NT5DC1Q5TFE4 455 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 TCEAL6Q6IPX3 200 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 FSTL4Q6MZW2 842 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 ARMCX5Q6P1M9 558 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 PADI6Q6TGC4 694 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 RNF19BQ6ZMZ0 732 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 RUFY3Q7L099 469 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 USP37Q86T82 979 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 CATSPER3Q86XQ3 398 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 CCDC26Q8TAB7 109 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 ERMNQ8TAM6 284 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 WASF1Q92558 559 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 TCEAL3Q969E4 200 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 TBC1D32Q96NH3 1257 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 AIFM3Q96NN9 605 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 LRRC3BQ96PB8 259 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 TCHPQ9BT92 498 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 CCDC113Q9H0I3 377 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 BRMS1Q9HCU9 246 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 EBF1Q9UH73 591 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 YIPF1Q9Y548 306 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 PHLPP2Q6ZVD8 1323 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 KIF26AQ9ULI4 1882 aaPredicted RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 CHD6Q8TD26 2715 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 ZNF638Q14966 1978 aaKnown RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 FASNP49327 2511 aaKnown RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 LNP1A1A4G5 178 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 OR6C75A6NL08 312 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 H0Y626 953 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 TAF4O00268 1085 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 CDX4O14627 284 aaPredicted RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 DCLK1O15075 740 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 RNF40O75150 1001 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 CDC45O75419 566 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 TRIM16O95361 564 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 APBB3O95704 486 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 TOP3BO95985 862 aaKnown RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 SPATA31C1P0DKV0 1188 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 MCF2P10911 925 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 GABRR2P28476 465 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 CDC25CP30307 473 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 KRT2P35908 639 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 GALK1P51570 392 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 DGKEP52429 567 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 IRX4P78413 519 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 LMAN2Q12907 356 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 STK3Q13188 491 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 MYBPC2Q14324 1141 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 ZNF568Q3ZCX4 644 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 CENPPQ6IPU0 288 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 CC2D1AQ6P1N0 951 aaPredicted RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 PKN3Q6P5Z2 889 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 GAREM2Q75VX8 874 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 SYT13Q7L8C5 426 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 TMC8Q8IU68 726 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 DEFB124Q8NES8 71 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 BEST2Q8NFU1 509 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 KIFAP3Q92845 792 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 PSMG2Q969U7 264 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 ZMAT2Q96NC0 199 aaKnown RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 PGLYRP2Q96PD5 576 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 GCNAQ96QF7 691 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 HHIPQ96QV1 700 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 ACO2Q99798 780 aaKnown RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 P2RY13Q9BPV8 354 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 FAM83CQ9BQN1 747 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 POLR3CQ9BUI4 534 aaPredicted RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 NUSAP1Q9BXS6 441 aaKnown RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 MRPL4Q9BYD3 311 aaKnown RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 DNAJC25Q9H1X3 360 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 TMEM134Q9H6X4 195 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 ANKFY1Q9P2R3 1169 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 HSFX1Q9UBD0 423 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 KCNG1Q9UIX4 513 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 SLC27A5Q9Y2P5 690 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 RBM19Q9Y4C8 960 aaKnown RBP5.65□□□□□ -1.5
SPG11-208ENST00000558155 CYP46A1Q9Y6A2 500 aa5.65□□□□□ -1.5
SPG11-208ENST00000558155 EML5Q05BV3 1969 aa5.65□□□□□ -1.51
SPG11-208ENST00000558155 NCANO14594 1321 aa5.65□□□□□ -1.51
SPG11-208ENST00000558155 CITO14578 2027 aa5.65□□□□□ -1.51
SPG11-208ENST00000558155 ASCC3Q8N3C0 2202 aaKnown RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 WDR87Q6ZQQ6 2873 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 EIF4E1BA6NMX2 242 aaKnown RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 CCDC169A6NNP5 214 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 M0QZQ0 153 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 MEFVO15553 781 aaPredicted RBP5.64□□□□□ -1.51
SPG11-208ENST00000558155 NEMFO60524 1076 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 MED24O75448 989 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 REC8O95072 547 aa5.64□□□□□ -1.51
SPG11-208ENST00000558155 EGFP01133 1207 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms