RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 LNX2Q8N448 690 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 Q8NA96 180 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 PSD4Q8NDX1 1056 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 SLC30A5Q8TAD4 765 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 KLHDC4Q8TBB5 520 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 DIS3LQ8TF46 1054 aaKnown RBP4.3□□□□□ -1.72
SPG11-206ENST00000558093 FBXO41Q8TF61 875 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 JDP2Q8WYK2 163 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 FBXL20Q96IG2 436 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 AIFM3Q96NN9 605 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 KRTAP17-1Q9BYP8 105 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 SLC12A5Q9H2X9 1139 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 KIAA1586Q9HCI6 787 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 TCEAL9Q9UHQ7 104 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 CPA4Q9UI42 421 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 NOB1Q9ULX3 412 aaKnown RBP4.3□□□□□ -1.72
SPG11-206ENST00000558093 PCDHA6Q9UN73 950 aa4.3□□□□□ -1.72
SPG11-206ENST00000558093 A0A0B4J269 797 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 ZAR1LA6NP61 321 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 F5H697 171 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 TRIAP1O43715 76 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 U2AF1L5P0DN76 240 aaPredicted RBP4.29□□□□□ -1.72
SPG11-206ENST00000558093 SRGNP10124 158 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 PPP3CBP16298 524 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 TYRP1P17643 537 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 MPLP40238 635 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 NDUFV1P49821 464 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 U2AF1Q01081 240 aaKnown RBP eCLIP4.29□□□□□ -1.724e-6■□□□□ 8.9
SPG11-206ENST00000558093 COL10A1Q03692 680 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 TUBB3Q13509 450 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 HABP2Q14520 560 aaPredicted RBP4.29□□□□□ -1.72
SPG11-206ENST00000558093 HLXQ14774 488 aaPredicted RBP4.29□□□□□ -1.72
SPG11-206ENST00000558093 KHDC1LQ5JSQ8 128 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 DAAM2Q86T65 1068 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 USP37Q86T82 979 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 FAM9AQ8IZU1 332 aaPredicted RBP4.29□□□□□ -1.72
SPG11-206ENST00000558093 FAM46DQ8NEK8 389 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 CAGE1Q8TC20 777 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 CAMKK2Q96RR4 588 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 DUSP26Q9BV47 211 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 RSAD1Q9HA92 442 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 VSX1Q9NZR4 365 aaPredicted RBP4.29□□□□□ -1.72
SPG11-206ENST00000558093 STAP2Q9UGK3 403 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 TLK1Q9UKI8 766 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 AGAP1Q9UPQ3 857 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 RAD54BQ9Y620 910 aa4.29□□□□□ -1.72
SPG11-206ENST00000558093 POLR2AP24928 1970 aaKnown RBP4.29□□□□□ -1.72
SPG11-206ENST00000558093 H3BML4 177 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 RFPL1O75677 317 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 SOAT2O75908 522 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 SCGB1D2O95969 90 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 CHRM2P08172 466 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 GATA3P23771 443 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 HTR1BP28222 390 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 CD6P30203 668 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 ADRA1BP35368 520 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 NANOS3P60323 173 aaKnown RBP4.28□□□□□ -1.72
SPG11-206ENST00000558093 RAB1AP62820 205 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 NKX6-1P78426 367 aaPredicted RBP4.28□□□□□ -1.72
SPG11-206ENST00000558093 ITIH3Q06033 890 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 GTF2H3Q13889 308 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 FGL2Q14314 439 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 PPP2R5AQ15172 486 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 KAZNQ674X7 775 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 TAF2Q6P1X5 1199 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 VWA1Q6PCB0 445 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 LAYNQ6UX15 382 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 TSHZ1Q6ZSZ6 1077 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 CHPFQ8IZ52 775 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 MYCBPAPQ8TBZ2 947 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 POC1BQ8TC44 478 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 LPIN2Q92539 896 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 LRIG1Q96JA1 1093 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 TPSD1Q9BZJ3 242 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 TTYH3Q9C0H2 523 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 SMOC2Q9H3U7 446 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 ETAA1Q9NY74 926 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 THRAP3Q9Y2W1 955 aaKnown RBP4.28□□□□□ -1.72
SPG11-206ENST00000558093 INSL6Q9Y581 213 aa4.28□□□□□ -1.72
SPG11-206ENST00000558093 PRSS29PA6NIE9 313 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 MARCH6O60337 910 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 UBXN7O94888 489 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 UNC5CO95185 931 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 MYBP10242 640 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 PIM1P11309 404 aaPredicted RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 HDCP19113 662 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 LPOP22079 712 aaPredicted RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 FOLR3P41439 243 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 SATB1Q01826 763 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 ZNF169Q14929 603 aaPredicted RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 NBPF8Q3BBV2 869 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 PRR16Q569H4 304 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 FAM160B1Q5W0V3 765 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 CXorf57Q6NSI4 855 aaKnown RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 RAVER1Q8IY67 606 aaKnown RBP4.27□□□□□ -1.73
SPG11-206ENST00000558093 ZBTB34Q8NCN2 500 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 PPP1R35Q8TAP8 253 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 TFAP2BQ92481 460 aa4.27□□□□□ -1.73
SPG11-206ENST00000558093 PGBD1Q96JS3 809 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms