RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RAB20Q9NX57 234 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 BARX2Q9UMQ3 279 aaPredicted RBP27.4■■□□□ 1.98
SMAD6-202ENST00000557916 POLIQ9UNA4 740 aa27.4■■□□□ 1.98
SMAD6-202ENST00000557916 N4BP1O75113 896 aaKnown RBP27.39■■□□□ 1.97
SMAD6-202ENST00000557916 SPATA31D3P0C874 917 aa27.39■■□□□ 1.97
SMAD6-202ENST00000557916 MTIF2P46199 727 aaKnown RBP27.39■■□□□ 1.97
SMAD6-202ENST00000557916 ROR1Q01973 937 aa27.39■■□□□ 1.97
SMAD6-202ENST00000557916 MYL5Q02045 173 aa27.39■■□□□ 1.97
SMAD6-202ENST00000557916 DLX2Q07687 328 aaPredicted RBP27.39■■□□□ 1.97
SMAD6-202ENST00000557916 SPATA31D4Q6ZUB0 917 aa27.39■■□□□ 1.97
SMAD6-202ENST00000557916 SPATA18Q8TC71 538 aa27.39■■□□□ 1.97
SMAD6-202ENST00000557916 CLEC1BQ9P126 229 aa27.39■■□□□ 1.97
SMAD6-202ENST00000557916 COQ4Q9Y3A0 265 aa27.39■■□□□ 1.97
SMAD6-202ENST00000557916 LRRN2O75325 713 aa27.38■■□□□ 1.97
SMAD6-202ENST00000557916 TBX10O75333 385 aa27.38■■□□□ 1.97
SMAD6-202ENST00000557916 AFPP02771 609 aaKnown RBP27.38■■□□□ 1.97
SMAD6-202ENST00000557916 P4HA1P13674 534 aa27.38■■□□□ 1.97
SMAD6-202ENST00000557916 MYL7Q01449 175 aa27.38■■□□□ 1.97
SMAD6-202ENST00000557916 SPOPLQ6IQ16 392 aa27.38■■□□□ 1.97
SMAD6-202ENST00000557916 RTP3Q9BQQ7 232 aa27.38■■□□□ 1.97
SMAD6-202ENST00000557916 PRUNE2Q8WUY3 3088 aa27.38■■□□□ 1.97
SMAD6-202ENST00000557916 PMM2O15305 246 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 CPB1P15086 417 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 KCNA5P22460 613 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 LHX1P48742 406 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 NOP14P78316 857 aaKnown RBP27.37■■□□□ 1.97
SMAD6-202ENST00000557916 OSTM1Q86WC4 334 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 OR10T2Q8NGX3 314 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 ZNF461Q8TAF7 563 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 KBTBD7Q8WVZ9 684 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 BPIFA3Q9BQP9 254 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 MAN1C1Q9NR34 630 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 FANCLQ9NW38 375 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 DDX43Q9NXZ2 648 aaKnown RBP27.37■■□□□ 1.97
SMAD6-202ENST00000557916 DPP7Q9UHL4 492 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 TSC2P49815 1807 aa27.37■■□□□ 1.97
SMAD6-202ENST00000557916 WDR27A2RRH5 827 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 KCNJ18B7U540 433 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 GABRDO14764 452 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 P4HA2O15460 535 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 TACC1O75410 805 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 FAM163BP0C2L3 166 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 OR4Q2P0C623 313 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 WARSP23381 471 aaKnown RBP27.36■■□□□ 1.97
SMAD6-202ENST00000557916 CETN1Q12798 172 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 KCNJ12Q14500 433 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 WDR44Q5JSH3 913 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 ANKRD54Q6NXT1 300 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 SCARA5Q6ZMJ2 495 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 KREMEN2Q8NCW0 462 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 TMEM209Q96SK2 561 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 MRPL45Q9BRJ2 306 aaKnown RBP27.36■■□□□ 1.97
SMAD6-202ENST00000557916 PLEKHA4Q9H4M7 779 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 APOBEC3GQ9HC16 384 aaKnown RBP27.36■■□□□ 1.97
SMAD6-202ENST00000557916 DZANK1Q9NVP4 752 aa27.36■■□□□ 1.97
SMAD6-202ENST00000557916 H3BQ06 376 aaPredicted RBP27.35■■□□□ 1.97
SMAD6-202ENST00000557916 ABLIM3O94929 683 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 EEF1GP26641 437 aaKnown RBP27.35■■□□□ 1.97
SMAD6-202ENST00000557916 CDKAL1Q5VV42 579 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 ELMSAN1Q6PJG2 1045 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 AOPEPQ8N6M6 819 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 HDAC7Q8WUI4 952 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 SNX25Q9H3E2 840 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 SMYD3Q9H7B4 428 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 FBXW11Q9UKB1 542 aa27.35■■□□□ 1.97
SMAD6-202ENST00000557916 SPDYE4A6NLX3 237 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 ZNF165P49910 485 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 GPR17Q13304 367 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 NCAPHQ15003 741 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 MAN2A1Q16706 1144 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 TCP11X2Q5H9J9 407 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 TPGS2Q68CL5 300 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 MSLNLQ96KJ4 702 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 ACBD6Q9BR61 282 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 TUBGCP2Q9BSJ2 902 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 ZCWPW1Q9H0M4 648 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 THEGQ9P2T0 379 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 BRWD1Q9NSI6 2320 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 PLXNA3P51805 1871 aa27.34■■□□□ 1.97
SMAD6-202ENST00000557916 HOXB8P17481 243 aaPredicted RBP27.33■■□□□ 1.97
SMAD6-202ENST00000557916 PCSK1P29120 753 aa27.33■■□□□ 1.97
SMAD6-202ENST00000557916 GNL1P36915 607 aaPredicted RBP27.33■■□□□ 1.97
SMAD6-202ENST00000557916 ASPAP45381 313 aa27.33■■□□□ 1.97
SMAD6-202ENST00000557916 RAP1GAPP47736 663 aa27.33■■□□□ 1.97
SMAD6-202ENST00000557916 CDH8P55286 799 aa27.33■■□□□ 1.97
SMAD6-202ENST00000557916 TSPY1Q01534 308 aa27.33■■□□□ 1.97
SMAD6-202ENST00000557916 OR6B3Q8NGW1 331 aa27.33■■□□□ 1.97
SMAD6-202ENST00000557916 NIF3L1Q9GZT8 377 aa27.33■■□□□ 1.97
SMAD6-202ENST00000557916 HCRTO43612 131 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 PRKCSHP14314 528 aaPredicted RBP27.33■■□□□ 1.96
SMAD6-202ENST00000557916 ATF2P15336 505 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 ACAT1P24752 427 aaKnown RBP27.33■■□□□ 1.96
SMAD6-202ENST00000557916 LMO2P25791 158 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 CLUL1Q15846 466 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 LIN9Q5TKA1 542 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 SYCE2Q6PIF2 218 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 RNF19BQ6ZMZ0 732 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 DCP1BQ8IZD4 617 aaKnown RBP27.33■■□□□ 1.96
SMAD6-202ENST00000557916 SDCBP2Q9H190 292 aa27.33■■□□□ 1.96
SMAD6-202ENST00000557916 AFF4Q9UHB7 1163 aaKnown RBP27.33■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms