RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 FGFR3P22607 806 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 ATICP31939 592 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 MYL7Q01449 175 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 KCNH2Q12809 1159 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 IER5LQ5T953 404 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 PRSS55Q6UWB4 352 aaPredicted RBP13.14□□□□□ -0.31
RCCD1-209ENST00000557750 TRIM67Q6ZTA4 783 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 EFHBQ8N7U6 833 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
RCCD1-209ENST00000557750 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 MMS19Q96T76 1030 aa13.14□□□□□ -0.31
RCCD1-209ENST00000557750 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.14□□□□□ -0.315e-13■■■■■ 64.1
RCCD1-209ENST00000557750 C2orf71A6NGG8 1288 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 PES1O00541 588 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 HUS1O60921 280 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 N4BP1O75113 896 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 CAVIN2O95810 425 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 CDK11BP21127 795 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 NRIP1P48552 1158 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 FMO5P49326 533 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 TNNC1P63316 161 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 YWHAHQ04917 246 aaPredicted RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 CETN1Q12798 172 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 NCAPHQ15003 741 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 PSMD5Q16401 504 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 SGSM1Q2NKQ1 1148 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 TCP11X2Q5H9J9 407 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 CDKAL1Q5VV42 579 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 KIAA0319Q5VV43 1072 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 PDXDC1Q6P996 788 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 LRSAM1Q6UWE0 723 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 RBM23Q86U06 439 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 DHX40Q8IX18 779 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 PBXIP1Q96AQ6 731 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 ELMO3Q96BJ8 720 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 PKNOX2Q96KN3 472 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 PI4K2AQ9BTU6 479 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 EMILIN2Q9BXX0 1053 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 XYLT2Q9H1B5 865 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 RAB20Q9NX57 234 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 GDAP2Q9NXN4 497 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 NXF1Q9UBU9 619 aaKnown RBP13.13□□□□□ -0.31
RCCD1-209ENST00000557750 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 TRIP11Q15643 1979 aa13.13□□□□□ -0.31
RCCD1-209ENST00000557750 LOC730098B7Z3J9 87 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 GLP2RO95838 553 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 ZNF667Q5HYK9 610 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 METTL23Q86XA0 190 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 SMRP1Q8NCR6 262 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 ANKRD20A12PQ8NF67 263 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 LNX1Q8TBB1 728 aaPredicted RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 TAF4BQ92750 862 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 NAP1L5Q96NT1 182 aaPredicted RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 TLE6Q9H808 572 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 CBX8Q9HC52 389 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 DSEQ9UL01 958 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 IRAK3Q9Y616 596 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 ANK1P16157 1881 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 PER2O15055 1255 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 STAU1O95793 577 aaKnown RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 ASS1P00966 412 aaKnown RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 TPM2P07951 284 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 CNPP09543 421 aaKnown RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 P4HA1P13674 534 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 RPL17P18621 184 aaKnown RBP13.12□□□□□ -0.31
RCCD1-209ENST00000557750 TYMPP19971 482 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 ZXDAP98168 799 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 CREMQ03060 361 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 CTXN3Q4LDR2 81 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 SPOPLQ6IQ16 392 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 LUZP1Q86V48 1076 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 GPR65Q8IYL9 337 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 PDCL2Q8N4E4 241 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 FAM200AQ8TCP9 573 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 VRTNQ9H8Y1 702 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 POLIQ9UNA4 740 aa13.12□□□□□ -0.31
RCCD1-209ENST00000557750 USP15Q9Y4E8 981 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms