RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CDYLQ9Y232 598 aa5.64□□□□□ -1.51
PRPF39-212ENST00000557477 GRIN2BQ13224 1484 aa5.64□□□□□ -1.51
PRPF39-212ENST00000557477 CLASP1Q7Z460 1538 aa5.64□□□□□ -1.51
PRPF39-212ENST00000557477 A0A087WWL8 130 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 CCDC78A2IDD5 438 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 COMTP21964 271 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 GCSHP23434 173 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 APOBEC3AP31941 199 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-212ENST00000557477 IL6STP40189 918 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-212ENST00000557477 NHLH2Q02577 135 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 HHEXQ03014 270 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 GRAMD1BQ3KR37 738 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 FAM102AQ5T9C2 384 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-212ENST00000557477 LMBRD2Q68DH5 695 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-212ENST00000557477 ERAP2Q6P179 960 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 PPP1R32Q7Z5V6 425 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 SGMS1Q86VZ5 419 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 MPP5Q8N3R9 675 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 SLC15A4Q8N697 577 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 ENAHQ8N8S7 591 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-212ENST00000557477 FAM46DQ8NEK8 389 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 DNERQ8NFT8 737 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 Q8TCH9 128 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 POF1BQ8WVV4 589 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 TEPSINQ96N21 525 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 BRIP1Q9BX63 1249 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 ZNF518BQ9C0D4 1074 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 VPS11Q9H270 941 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 GJB4Q9NTQ9 266 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 PADI4Q9UM07 663 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 PLEKHM1Q9Y4G2 1056 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 PCDHGB2Q9Y5G2 931 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 SYNJ2O15056 1496 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 PBRM1Q86U86 1689 aa5.63□□□□□ -1.51
PRPF39-212ENST00000557477 A0A1W2PPC4 97 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 F5H423 210 aaPredicted RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 APOL1O14791 398 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 VPS4BO75351 444 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 FGF18O76093 207 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 CHEK2O96017 543 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 THP07101 528 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 HARSP12081 509 aaKnown RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 CKBP12277 381 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 IL1R1P14778 569 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 ACO1P21399 889 aaKnown RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 SCNN1GP51170 649 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 RAB32Q13637 225 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 ICAM4Q14773 271 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 DGKKQ5KSL6 1271 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 AGAP9Q5VTM2 703 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 DCAF12L1Q5VU92 463 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 NAIF1Q69YI7 327 aaPredicted RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 MAMDC4Q6UXC1 1216 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 HTR3DQ70Z44 454 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 NSUN7Q8NE18 718 aaKnown RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 NUP133Q8WUM0 1156 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 DDX17Q92841 729 aaKnown RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 MARS2Q96GW9 593 aaKnown RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 ZC3H10Q96K80 434 aaKnown RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 SNX22Q96L94 193 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 WWC2-AS2Q96NR7 200 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 RBM15Q96T37 977 aaKnown RBP eCLIP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 MNTQ99583 582 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 CRB3Q9BUF7 120 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 GPR87Q9BY21 358 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 TRMT13Q9NUP7 481 aaKnown RBP5.62□□□□□ -1.51
PRPF39-212ENST00000557477 WDR97A6NE52 1622 aa5.62□□□□□ -1.51
PRPF39-212ENST00000557477 A0A0G2JLL6 359 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-212ENST00000557477 PYCARD-AS1I3L0S3 204 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 ZNF185O15231 689 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 MT-ND5P03915 603 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 HOXA5P20719 270 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 FDXRP22570 491 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 PPM1AP35813 382 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 POU6F2P78424 691 aaPredicted RBP5.61□□□□□ -1.51
PRPF39-212ENST00000557477 BTKQ06187 659 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 TCF15Q12870 199 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 BOP1Q14137 746 aaKnown RBP5.61□□□□□ -1.51
PRPF39-212ENST00000557477 SLC44A4Q53GD3 710 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 FAM160B1Q5W0V3 765 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 TSHZ3Q63HK5 1081 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 AATKQ6ZMQ8 1374 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 UNC13DQ70J99 1090 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 RHOT2Q8IXI1 618 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 GSPT2Q8IYD1 628 aaKnown RBP5.61□□□□□ -1.51
PRPF39-212ENST00000557477 CFAP52Q8N1V2 620 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 ATP11CQ8NB49 1132 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 OR56A1Q8NGH5 318 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 CNPPD1Q9BV87 410 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 SPATA5L1Q9BVQ7 753 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 COLEC11Q9BWP8 271 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 WDR12Q9GZL7 423 aaKnown RBP5.61□□□□□ -1.51
PRPF39-212ENST00000557477 ARFGAP3Q9NP61 516 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 A1CFQ9NQ94 594 aaKnown RBP5.61□□□□□ -1.51
PRPF39-212ENST00000557477 ETAA1Q9NY74 926 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 HSFX1Q9UBD0 423 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 XPR1Q9UBH6 696 aa5.61□□□□□ -1.51
PRPF39-212ENST00000557477 HESX1Q9UBX0 185 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms