RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 RARS2Q5T160 578 aaKnown RBP5.5□□□□□ -1.53
ATXN3-247ENST00000557311 IFIT1BQ5T764 474 aaKnown RBP5.5□□□□□ -1.53
ATXN3-247ENST00000557311 OVOS1Q6IE37 1185 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 SLC23A3Q6PIS1 610 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 LRRC55Q6ZSA7 311 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 PLPPR4Q7Z2D5 763 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 HOMER1Q86YM7 354 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 SLFN12Q8IYM2 578 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 ZNF654Q8IZM8 581 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 DCLK2Q8N568 766 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 C12orf76Q8N812 135 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-247ENST00000557311 DNAJB8Q8NHS0 232 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 SMARCC2Q8TAQ2 1214 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 CUL5Q93034 780 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 ZBTB10Q96DT7 871 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 KREMEN1Q96MU8 473 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 UBAC1Q9BSL1 405 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 NT5C1AQ9BXI3 368 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 KRT23Q9C075 422 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 AZI2Q9H6S1 392 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 KCNK12Q9HB15 430 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 MAD2L2Q9UI95 211 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 DUSP12Q9UNI6 340 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 ST3GAL5Q9UNP4 418 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 LCTP09848 1927 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 MYH4Q9Y623 1939 aa5.5□□□□□ -1.53
ATXN3-247ENST00000557311 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 MGEA5O60502 916 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 RECKO95980 971 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 SP9P0CG40 484 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 ARP10275 920 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 FGFR1P11362 822 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 ITGB5P18084 799 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 KLRC1P26715 233 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 TPP2P29144 1249 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 POLR2BP30876 1174 aaKnown RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 ALDH7A1P49419 539 aaKnown RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 STAT5BP51692 787 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 CRYBB1P53674 252 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 ATXN1P54253 815 aaKnown RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 ARHGAP8P85298 464 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 NMIQ13287 307 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 PLCB4Q15147 1175 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 NONOQ15233 471 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 ST3GAL2Q16842 350 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 USP17L6PQ6QN14 398 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 MTHFD1LQ6UB35 978 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 CCDC149Q6ZUS6 474 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 GPR149Q86SP6 731 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 ZNF589Q86UQ0 364 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 CABP7Q86V35 215 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 PPFIBP1Q86W92 1011 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 C1orf210Q8IVY1 113 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 KIAA0319LQ8IZA0 1049 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 SLC39A11Q8N1S5 342 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 LRRC43Q8N309 656 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 PIWIL2Q8TC59 973 aaKnown RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 SLC22A17Q8WUG5 538 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 RNF141Q8WVD5 230 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 EAF1Q96JC9 268 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 CASD1Q96PB1 797 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 PCYT2Q99447 389 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 LRRC3Q9BY71 257 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 CNNM2Q9H8M5 875 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 JADE2Q9NQC1 790 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 MBNL3Q9NUK0 354 aaKnown RBP5.49□□□□□ -1.53
ATXN3-247ENST00000557311 SLAMF8Q9P0V8 285 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 GINS2Q9Y248 185 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 IRAK3Q9Y616 596 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 SPTBN4Q9H254 2564 aa5.49□□□□□ -1.53
ATXN3-247ENST00000557311 PLXNA3P51805 1871 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SSU72P8A0A1W2PR75 194 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 MEIS2O14770 477 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 CYTH3O43739 400 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 HBP1O60381 514 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 KINO60870 393 aaKnown RBP5.48□□□□□ -1.53
ATXN3-247ENST00000557311 DNAJA2O60884 412 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 C8AP07357 584 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 EPCAMP16422 314 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 ZSCAN20P17040 1043 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-247ENST00000557311 CA8P35219 290 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SLC26A2P50443 739 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 POLGP54098 1239 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-247ENST00000557311 PDE1AP54750 535 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 RNF4P78317 190 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 MTMR1Q13613 665 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 GRM4Q14833 912 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SEC23AQ15436 765 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 IMMTQ16891 758 aaKnown RBP5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SLC35G1Q2M3R5 365 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 LETM2Q2VYF4 491 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 C20orf194Q5TEA3 1177 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 ANKRD45Q5TZF3 282 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 TMC5Q6UXY8 1006 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 C22orf34Q6ZV56 151 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 THAP5Q7Z6K1 395 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 NT5DC4Q86YG4 428 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 VPS52Q8N1B4 723 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SLC44A3Q8N4M1 653 aa5.48□□□□□ -1.53
ATXN3-247ENST00000557311 SUMF1Q8NBK3 374 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms