RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SDCBP2Q9H190 292 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 LRFN2Q9ULH4 789 aa25.34■■□□□ 1.65
SIX4-203ENST00000556952 DDX3XO00571 662 aaKnown RBP eCLIP25.33■■□□□ 1.65
SIX4-203ENST00000556952 PODXLO00592 558 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 AMHP03971 560 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 PAX3P23760 479 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 RAP1GAPP47736 663 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 VAV2P52735 878 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 LILRA4P59901 499 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 CYP27A1Q02318 531 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 FAM117BQ6P1L5 589 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 ZNF662Q6ZS27 426 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 KIAA1328Q86T90 577 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 NPAS4Q8IUM7 802 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 GLYCTKQ8IVS8 523 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 HERC6Q8IVU3 1022 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 LNX1Q8TBB1 728 aaPredicted RBP25.33■■□□□ 1.65
SIX4-203ENST00000556952 SLC20A1Q8WUM9 679 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 NAGPAQ9UK23 515 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 NENFQ9UMX5 172 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 PCDHA13Q9Y5I0 950 aa25.33■■□□□ 1.65
SIX4-203ENST00000556952 CILPO75339 1184 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 GNA15P30679 374 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 CLCNKBP51801 687 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 CDH8P55286 799 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 SMAD3P84022 425 aaKnown RBP25.32■■□□□ 1.64
SIX4-203ENST00000556952 ABI1Q8IZP0 508 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 CRIPAKQ8N1N5 446 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 PHOSPHO2Q8TCD6 241 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 DDX1Q92499 740 aaKnown RBP25.32■■□□□ 1.64
SIX4-203ENST00000556952 PBX4Q9BYU1 374 aa25.32■■□□□ 1.64
SIX4-203ENST00000556952 BARX2Q9UMQ3 279 aaPredicted RBP25.32■■□□□ 1.64
SIX4-203ENST00000556952 FGFR1P11362 822 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 MYOGP15173 224 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 UPP1Q16831 310 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 DPH6Q7L8W6 267 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 ACP6Q9NPH0 428 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 FNDC1Q4ZHG4 1894 aaPredicted RBP25.31■■□□□ 1.64
SIX4-203ENST00000556952 CDH23Q9H251 3354 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 COL4A6Q14031 1691 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 CASTOR2A6NHX0 329 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 SPTLC1O15269 473 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 TACC1O75410 805 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 PAEPP09466 180 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 MAGEA1P43355 309 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 FMO1Q01740 532 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 ALKBH5Q6P6C2 394 aaKnown RBP25.31■■□□□ 1.64
SIX4-203ENST00000556952 TOP6BLQ8N6T0 577 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 TSGA10Q9BZW7 698 aa25.31■■□□□ 1.64
SIX4-203ENST00000556952 YBX2Q9Y2T7 364 aaKnown RBP25.31■■□□□ 1.64
SIX4-203ENST00000556952 CHD7Q9P2D1 2997 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 UPP2O95045 317 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 FAM163BP0C2L3 166 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 CHRNB2P17787 502 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 ARHGAP29Q52LW3 1261 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 CCDC122Q5T0U0 273 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 TAF3Q5VWG9 929 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 LIMS2Q7Z4I7 341 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 TOP1MTQ969P6 601 aa25.3■■□□□ 1.64
SIX4-203ENST00000556952 SEPT11Q9NVA2 429 aaKnown RBP25.3■■□□□ 1.64
SIX4-203ENST00000556952 HUS1O60921 280 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 GJB5O95377 273 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 MMEP08473 750 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 DSC1Q08554 894 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 SOWAHAQ2M3V2 549 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 APPL2Q8NEU8 664 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 MRPL9Q9BYD2 267 aaKnown RBP25.29■■□□□ 1.64
SIX4-203ENST00000556952 TBC1D13Q9NVG8 400 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 TSC2P49815 1807 aa25.29■■□□□ 1.64
SIX4-203ENST00000556952 DNAJB2P25686 324 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 AARSP49588 968 aaKnown RBP eCLIP25.28■■□□□ 1.64
SIX4-203ENST00000556952 RAD23BP54727 409 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 KIF5AQ12840 1032 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 ZNF394Q53GI3 561 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 TRIM72Q6ZMU5 477 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 UNC93AQ86WB7 457 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 WHAMMQ8TF30 809 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 TMEM176AQ96HP8 235 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 DNAI2Q9GZS0 605 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 INTUQ9ULD6 942 aa25.28■■□□□ 1.64
SIX4-203ENST00000556952 PJA2O43164 708 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 THAP12O43422 761 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 KRT86O43790 486 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 GZMAP12544 262 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 NDST1P52848 882 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 RNASELQ05823 741 aaKnown RBP25.27■■□□□ 1.64
SIX4-203ENST00000556952 NYAP1Q6ZVC0 841 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 CASD1Q96PB1 797 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 FAM193BQ96PV7 902 aaPredicted RBP25.27■■□□□ 1.64
SIX4-203ENST00000556952 NT5C1AQ9BXI3 368 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 LZTFL1Q9NQ48 299 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 CACNG4Q9UBN1 327 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 ARHGAP25P42331 645 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 DCLRE1AQ6PJP8 1040 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 SLC4A11Q8NBS3 891 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 C3orf58Q8NDZ4 430 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 ZNF606Q8WXB4 792 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 MRPL45Q9BRJ2 306 aaKnown RBP25.27■■□□□ 1.64
SIX4-203ENST00000556952 PAAF1Q9BRP4 392 aa25.27■■□□□ 1.64
SIX4-203ENST00000556952 ZBED2Q9BTP6 218 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms