RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ZCWPW1Q9H0M4 648 aa24.57■■□□□ 1.52
TDP1-216ENST00000556867 NOTCH4Q99466 2003 aa24.57■■□□□ 1.52
TDP1-216ENST00000556867 PI4K2BG5E9Z4 385 aa24.56■■□□□ 1.52
TDP1-216ENST00000556867 STAU1O95793 577 aaKnown RBP24.56■■□□□ 1.52
TDP1-216ENST00000556867 CST3P01034 146 aaPredicted RBP24.56■■□□□ 1.52
TDP1-216ENST00000556867 LRG1P02750 347 aa24.56■■□□□ 1.52
TDP1-216ENST00000556867 ENPEPQ07075 957 aa24.56■■□□□ 1.52
TDP1-216ENST00000556867 ADAM9Q13443 819 aa24.56■■□□□ 1.52
TDP1-216ENST00000556867 TDRD10Q5VZ19 366 aaKnown RBP24.56■■□□□ 1.52
TDP1-216ENST00000556867 DPH6Q7L8W6 267 aa24.56■■□□□ 1.52
TDP1-216ENST00000556867 GRASPQ7Z6J2 395 aaPredicted RBP24.56■■□□□ 1.52
TDP1-216ENST00000556867 PLCD3Q8N3E9 789 aa24.56■■□□□ 1.52
TDP1-216ENST00000556867 ACSF2Q96CM8 615 aaPredicted RBP24.56■■□□□ 1.52
TDP1-216ENST00000556867 PGLYRP2Q96PD5 576 aa24.56■■□□□ 1.52
TDP1-216ENST00000556867 MTMR11A4FU01 709 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 IKBKBO14920 756 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 DCXO43602 365 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 PSMC2P35998 433 aaKnown RBP24.55■■□□□ 1.52
TDP1-216ENST00000556867 PPP1R2P41236 205 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 DLG4P78352 724 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 SOWAHAQ2M3V2 549 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 INTS8Q75QN2 995 aaKnown RBP24.55■■□□□ 1.52
TDP1-216ENST00000556867 FAM186BQ8IYM0 893 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 ADGRF2Q8IZF7 708 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 MKNK1Q9BUB5 465 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 POLIQ9UNA4 740 aa24.55■■□□□ 1.52
TDP1-216ENST00000556867 MYO10Q9HD67 2058 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 N4BP1O75113 896 aaKnown RBP24.54■■□□□ 1.52
TDP1-216ENST00000556867 C4BPAP04003 597 aaKnown RBP24.54■■□□□ 1.52
TDP1-216ENST00000556867 ALADP13716 330 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 ATICP31939 592 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 VAMP7P51809 220 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 LRRC63Q05C16 580 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 SMARCB1Q12824 385 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 BIRC3Q13489 604 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 TRPC3Q13507 836 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 STIM1Q13586 685 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 MORC3Q14149 939 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 ZACNQ401N2 412 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 C1orf220Q5T0J3 134 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 ZC3H3Q8IXZ2 948 aaKnown RBP24.54■■□□□ 1.52
TDP1-216ENST00000556867 TSG101Q99816 390 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 XYLT2Q9H1B5 865 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 CRISPLD1Q9H336 500 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 HSFX1Q9UBD0 423 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 MUTYHQ9UIF7 546 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 YIPF1Q9Y548 306 aa24.54■■□□□ 1.52
TDP1-216ENST00000556867 GABRDO14764 452 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 PSMA7O14818 248 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 CETN3O15182 167 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 PHACTR2O75167 634 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 BMP6P22004 513 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 FSHRP23945 695 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 LHX1P48742 406 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 PMS1P54277 932 aaKnown RBP24.53■■□□□ 1.52
TDP1-216ENST00000556867 MCCD1P59942 119 aaPredicted RBP24.53■■□□□ 1.52
TDP1-216ENST00000556867 MYL6P60660 151 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 NTHL1P78549 312 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 SLC39A12Q504Y0 691 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 ISM2Q6H9L7 571 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 OSTM1Q86WC4 334 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 ATAD1Q8NBU5 361 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 SYAP1Q96A49 352 aaPredicted RBP24.53■■□□□ 1.52
TDP1-216ENST00000556867 ACBD6Q9BR61 282 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 EPHX3Q9H6B9 360 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 VRTNQ9H8Y1 702 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 HCFC1R1Q9NWW0 138 aa24.53■■□□□ 1.52
TDP1-216ENST00000556867 DDX43Q9NXZ2 648 aaKnown RBP24.53■■□□□ 1.52
TDP1-216ENST00000556867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.53■■□□□ 1.52
TDP1-216ENST00000556867 DNMT3BQ9UBC3 853 aaKnown RBP24.53■■□□□ 1.52
TDP1-216ENST00000556867 KRT13P13646 458 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 CD44P16070 742 aaKnown RBP24.52■■□□□ 1.52
TDP1-216ENST00000556867 MYL7Q01449 175 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 TSPY1Q01534 308 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 TWF1Q12792 350 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 DUSP4Q13115 394 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 NCOA4Q13772 614 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 ANKRD40Q6AI12 368 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 GET4Q7L5D6 327 aaPredicted RBP24.52■■□□□ 1.52
TDP1-216ENST00000556867 LRRTM3Q86VH5 581 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 DCP1BQ8IZD4 617 aaKnown RBP24.52■■□□□ 1.52
TDP1-216ENST00000556867 C2orf15Q8WU43 125 aaKnown RBP24.52■■□□□ 1.52
TDP1-216ENST00000556867 KBTBD7Q8WVZ9 684 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 DHTKD1Q96HY7 919 aaPredicted RBP24.52■■□□□ 1.52
TDP1-216ENST00000556867 MYADMQ96S97 322 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 AVENQ9NQS1 362 aaPredicted RBP24.52■■□□□ 1.52
TDP1-216ENST00000556867 EPS15L1Q9UBC2 864 aa24.52■■□□□ 1.52
TDP1-216ENST00000556867 VNN1O95497 513 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 FAM163BP0C2L3 166 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 WARSP23381 471 aaKnown RBP24.51■■□□□ 1.51
TDP1-216ENST00000556867 CCNE1P24864 410 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 PCSK1P29120 753 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 GBP2P32456 591 aaPredicted RBP24.51■■□□□ 1.51
TDP1-216ENST00000556867 FKBP3Q00688 224 aaKnown RBP24.51■■□□□ 1.51
TDP1-216ENST00000556867 PLD1Q13393 1074 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 PTPN21Q16825 1174 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 PABPC1LQ4VXU2 614 aaKnown RBP24.51■■□□□ 1.51
TDP1-216ENST00000556867 INTS6LQ5JSJ4 861 aaKnown RBP24.51■■□□□ 1.51
TDP1-216ENST00000556867 SV2AQ7L0J3 742 aa24.51■■□□□ 1.51
TDP1-216ENST00000556867 TTC9BQ8N6N2 239 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms