RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ARHGEF25Q86VW2 580 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 RHOT1Q8IXI2 618 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 KAT5Q92993 513 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 BCO1Q9HAY6 547 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 TRPM5Q9NZQ8 1165 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 ZIM2Q9NZV7 527 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 ZNF180Q9UJW8 692 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 TTC21BQ7Z4L5 1316 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 CCDC7Q96M83 1385 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 GASTP01350 101 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 FPR1P21462 350 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 HMGB2P26583 209 aaKnown RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 ADKP55263 362 aaKnown RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 NANOS3P60323 173 aaKnown RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 SLC15A2Q16348 729 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 CATIPQ7Z7H3 387 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 VRK3Q8IV63 474 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 DNAJC10Q8IXB1 793 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 MIER2Q8N344 545 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 ZGPATQ8N5A5 531 aaKnown RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 JPH3Q8WXH2 748 aaPredicted RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 C7orf25Q9BPX7 421 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 SLC46A2Q9BY10 475 aa6.5□□□□□ -1.37
HIF1A-209ENST00000556827 ZNF768Q9H5H4 540 aaKnown RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 SAP30BPQ9UHR5 308 aaKnown RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 AJAP1Q9UKB5 411 aaPredicted RBP6.5□□□□□ -1.37
HIF1A-209ENST00000556827 ROCK2O75116 1388 aaKnown RBP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 KTN1Q86UP2 1357 aaKnown RBP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 FAM171A2A8MVW0 826 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 AHRRA9YTQ3 701 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 B5MCH6 92 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 ENDOD1O94919 500 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 AMY1AP04745 511 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 CT47B1P0C2W7 299 aaPredicted RBP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 IL2RBP14784 551 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 WASP42768 502 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 GPR162Q16538 588 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 GDF7Q7Z4P5 450 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 TPH2Q8IWU9 490 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 OR10H5Q8NGA6 315 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 SLC35B2Q8TB61 432 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 CRAMP1Q96RY5 1269 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 DCLRE1CQ96SD1 692 aaKnown RBP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 SENP6Q9GZR1 1112 aaPredicted RBP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 LANCL2Q9NS86 450 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 TERF2IPQ9NYB0 399 aa6.49□□□□□ -1.37
HIF1A-209ENST00000556827 NOB1Q9ULX3 412 aaKnown RBP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 CPSF1Q10570 1443 aaKnown RBP6.49□□□□□ -1.37
HIF1A-209ENST00000556827 NRKQ7Z2Y5 1582 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 TNS1Q9HBL0 1735 aaKnown RBP6.48□□□□□ -1.37
HIF1A-209ENST00000556827 PHRF1Q9P1Y6 1649 aaKnown RBP6.48□□□□□ -1.37
HIF1A-209ENST00000556827 LEFTY2O00292 366 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 PCSK1P29120 753 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 PTTG1IPP53801 180 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 TARDBPQ13148 414 aaKnown RBP eCLIP6.48□□□□□ -1.37
HIF1A-209ENST00000556827 CSRP2Q16527 193 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 PDZD4Q76G19 769 aaPredicted RBP6.48□□□□□ -1.37
HIF1A-209ENST00000556827 MIGA2Q7L4E1 593 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 ZNF572Q7Z3I7 529 aaPredicted RBP6.48□□□□□ -1.37
HIF1A-209ENST00000556827 HDAC10Q969S8 669 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 SYT17Q9BSW7 474 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 CDH19Q9H159 772 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 TCF7L1Q9HCS4 588 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 RUVBL1Q9Y265 456 aaKnown RBP6.48□□□□□ -1.37
HIF1A-209ENST00000556827 ANKRD6Q9Y2G4 727 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 ACTL7AQ9Y615 435 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 BCL9O00512 1426 aa6.48□□□□□ -1.37
HIF1A-209ENST00000556827 ARHGEF28Q8N1W1 1705 aaKnown RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 ATRNL1Q5VV63 1379 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 RNASET2O00584 256 aaKnown RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 RHOBTB3O94955 611 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 ALOX15P16050 662 aaPredicted RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 PDCP20941 246 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 ZFP36P26651 326 aaKnown RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 GUCY1A2P33402 732 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 RNASE9P60153 205 aaKnown RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 FAM189BP81408 668 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 NHLH2Q02577 135 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 NFE2Q16621 373 aaPredicted RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 AFMIDQ63HM1 303 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 EFCAB12Q6NXP0 572 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 PTF1AQ7RTS3 328 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 GPRIN1Q7Z2K8 1008 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 TFAP2CQ92754 450 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 MYEOVQ96EZ4 313 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 LRGUKQ96M69 825 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 MYOCQ99972 504 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 GTPBP4Q9BZE4 634 aaKnown RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 TFCP2L1Q9NZI6 479 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 PCDHB1Q9Y5F3 818 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 HS3ST4Q9Y661 456 aa6.47□□□□□ -1.37
HIF1A-209ENST00000556827 MYBBP1AQ9BQG0 1328 aaKnown RBP6.47□□□□□ -1.37
HIF1A-209ENST00000556827 CXorf49A8MYA2 514 aaPredicted RBP6.46□□□□□ -1.38
HIF1A-209ENST00000556827 PRPF3O43395 683 aaKnown RBP6.46□□□□□ -1.38
HIF1A-209ENST00000556827 B3GALT2O43825 422 aa6.46□□□□□ -1.38
HIF1A-209ENST00000556827 NCR1O76036 304 aa6.46□□□□□ -1.38
HIF1A-209ENST00000556827 SCGB1D2O95969 90 aa6.46□□□□□ -1.38
HIF1A-209ENST00000556827 POU2F2P09086 479 aa6.46□□□□□ -1.38
HIF1A-209ENST00000556827 RAP2AP10114 183 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 535.5 ms