RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 AFF4Q9UHB7 1163 aaKnown RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 GPSM3Q9Y4H4 160 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 KIAA1671Q9BY89 1806 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 PIEZO1Q92508 2521 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 WDR27A2RRH5 827 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 POLR2DO15514 142 aaKnown RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 FAM189A1O60320 539 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 N4BP1O75113 896 aaKnown RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 SRFP11831 508 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 TYMPP19971 482 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 IGFBP6P24592 240 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 SCNN1AP37088 669 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 ASIC1P78348 528 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 TFAMQ00059 246 aaKnown RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 PFKPQ01813 784 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 DPYDQ12882 1025 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 TAF12Q16514 161 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 ZBTB41Q5SVQ8 909 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 C9orf57Q5W0N0 161 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 SIX5Q8N196 739 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 RTP3Q9BQQ7 232 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 CORO1BQ9BR76 489 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 KIAA1586Q9HCI6 787 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 KBTBD4Q9NVX7 518 aa7.92□□□□□ -1.14
SCFD1-222ENST00000556768 RBAKQ9NYW8 714 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 TIMM13Q9Y5L4 95 aaPredicted RBP7.92□□□□□ -1.14
SCFD1-222ENST00000556768 WDR87Q6ZQQ6 2873 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 MUC6Q6W4X9 2439 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 ZDBF2Q9HCK1 2354 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 VPS13AQ96RL7 3174 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 FRMD3A2A2Y4 597 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 ARHGAP33O14559 1287 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 CYB561D2O14569 222 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 EXTL3O43909 919 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 TBC1D4O60343 1298 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 RHOP08100 348 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 NFICP08651 508 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 ADSSP30520 456 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 TUFMP49411 452 aaKnown RBP7.91□□□□□ -1.14
SCFD1-222ENST00000556768 AARSP49588 968 aaKnown RBP eCLIP7.91□□□□□ -1.14
SCFD1-222ENST00000556768 TAF6P49848 677 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 EPHB3P54753 998 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 MCCD1P59942 119 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-222ENST00000556768 KCNH2Q12809 1159 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 SMARCB1Q12824 385 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 GPR17Q13304 367 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 MYBPC2Q14324 1141 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 SURF1Q15526 300 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 PTPRNQ16849 979 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 SV2CQ496J9 727 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 SLC39A4Q6P5W5 647 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 HS2ST1Q7LGA3 356 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 GIPC2Q8TF65 315 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 RSAD2Q8WXG1 361 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 CCDC34Q96HJ3 373 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 SENP8Q96LD8 212 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF560Q96MR9 790 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 STRA6Q9BX79 667 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 TRIM9Q9C026 710 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 ASAH2Q9NR71 780 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 DNMT3BQ9UBC3 853 aaKnown RBP7.91□□□□□ -1.14
SCFD1-222ENST00000556768 INSL5Q9Y5Q6 135 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 NUMBLQ9Y6R0 609 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 ARID2Q68CP9 1835 aa7.91□□□□□ -1.14
SCFD1-222ENST00000556768 ANKRD33BA6NCL7 494 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF233A6NK53 670 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 KPNA7A9QM74 516 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 TISP43B9A030 160 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 ANHXE9PGG2 379 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 PIRO00625 290 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 MEFVO15553 781 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-222ENST00000556768 HUS1O60921 280 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 MICAL2O94851 1124 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 PRPF6O94906 941 aaKnown RBP7.9□□□□□ -1.14
SCFD1-222ENST00000556768 TMEM191BP0C7N4 346 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 SNRPFP62306 86 aaKnown RBP7.9□□□□□ -1.14
SCFD1-222ENST00000556768 CLDN10P78369 228 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 KRT85P78386 507 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 NTHL1P78549 312 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 TWF1Q12792 350 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 MYO1EQ12965 1108 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 BECN1Q14457 450 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 VEPH1Q14D04 833 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 SHC4Q6S5L8 630 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 GPD1LQ8N335 351 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 CSGALNACT2Q8N6G5 542 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 FEZF2Q8TBJ5 459 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 ANKRD36BP1Q96IX9 119 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 GPR88Q9GZN0 384 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 SLITRK6Q9H5Y7 841 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.14
SCFD1-222ENST00000556768 HCFC1R1Q9NWW0 138 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 PCDHA7Q9UN72 937 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 ASB3Q9Y575 518 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 USP34Q70CQ2 3546 aa7.9□□□□□ -1.14
SCFD1-222ENST00000556768 MYO15AQ9UKN7 3530 aa7.9□□□□□ -1.15
SCFD1-222ENST00000556768 A0A087X0B3 334 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ANO9A1A5B4 782 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms