RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, human

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-215	ENST00000556587	PPFIA2	O75334	1257 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	ARIH2	O95376	493 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	CYP2C9	P11712	490 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	EFNA5	P52803	228 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	RAB30	Q15771	203 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	CYP1B1	Q16678	543 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZACN	Q401N2	412 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	B4GALNT4	Q76KP1	1039 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZSWIM2	Q8NEG5	633 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	OR6J1	Q8NGC5	347 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	DDX1	Q92499	740 aa	Known RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	ALG3	Q92685	438 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	COPS5	Q92905	334 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	KAT5	Q92993	513 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	MAGOHB	Q96A72	148 aa	Known RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	MTG1	Q9BT17	334 aa	Predicted RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	MTIF3	Q9H2K0	278 aa	Known RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	MRPL47	Q9HD33	250 aa	Known RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	CNOT8	Q9UFF9	292 aa	Known RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	TRIP12	Q14669	1992 aa	Predicted RBP	13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	BDP1	A6H8Y1	2624 aa		13.54	□□□□□ -0.24
SRSF5-215	ENST00000556587	PTPRS	Q13332	1948 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	IGKV6D-21	A0A0A0MT36	114 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	TMEM110-MUSTN1	A8MSY1	372 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	ARL2	P36404	184 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	PIK3CA	P42336	1068 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	DHX9	Q08211	1270 aa	Known RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	SLMAP	Q14BN4	828 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	SURF1	Q15526	300 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	TMEM132A	Q24JP5	1023 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	CYFIP1	Q7L576	1253 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	JAML	Q86YT9	394 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	C12orf50	Q8NA57	414 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	POP1	Q99575	1024 aa	Known RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	JPH2	Q9BR39	696 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	IMPG2	Q9BZV3	1241 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	PRDM6	Q9NQX0	595 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	WDR81	Q562E7	1941 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	MYL3	P08590	195 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	NSF	P46459	744 aa	Known RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	RABGGTB	P53611	331 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	SP4	Q02446	784 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	IFFO1	Q0D2I5	559 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	NBPF20	Q3BBV1	942 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	CCDC62	Q6P9F0	684 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZPBP2	Q6X784	338 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	SRL	Q86TD4	932 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	ADGRA3	Q8IWK6	1321 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	C3orf20	Q8ND61	904 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	BCAS4	Q8TDM0	211 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	GRK7	Q8WTQ7	553 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	TCP11	Q8WWU5	503 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	GAS2L1	Q99501	681 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	STMN4	Q9H169	189 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	NKX2-4	Q9H2Z4	354 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	PLEKHA4	Q9H4M7	779 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	RBAK	Q9NYW8	714 aa	Predicted RBP	13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	RSPH14	Q9UHP6	348 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	MSRA	Q9UJ68	235 aa		13.53	□□□□□ -0.24
SRSF5-215	ENST00000556587	NCOR1	O75376	2440 aa		13.52	□□□□□ -0.24
SRSF5-215	ENST00000556587	MYH9	P35579	1960 aa	Known RBP	13.52	□□□□□ -0.24
SRSF5-215	ENST00000556587	LRRIQ4	A6NIV6	560 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	MYO1F	O00160	1098 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	C4BPA	P04003	597 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	PFKM	P08237	780 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	TXN	P10599	105 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	MYOG	P15173	224 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	CETN2	P41208	172 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	PTP4A2	Q12974	167 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	ZNF211	Q13398	564 aa	Predicted RBP	13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	TTLL4	Q14679	1199 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	TRADD	Q15628	312 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	CCDC137	Q6PK04	289 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	MICALCL	Q6ZW33	695 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	TAS1R3	Q7RTX0	852 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	PPP1R13L	Q8WUF5	828 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	SLCO2A1	Q92959	643 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	ZBTB9	Q96C00	473 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	CGRRF1	Q99675	332 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	MSTO1	Q9BUK6	570 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	CELF4	Q9BZC1	486 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	DPH5	Q9H2P9	285 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	AZI2	Q9H6S1	392 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	CNOT10	Q9H9A5	744 aa	Known RBP	13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	SLC28A3	Q9HAS3	691 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	NFS1	Q9Y697	457 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	SLC4A7	Q9Y6M7	1214 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	SCIN	Q9Y6U3	715 aa		13.52	□□□□□ -0.25
SRSF5-215	ENST00000556587	TULP2	O00295	520 aa		13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	PITPNM1	O00562	1244 aa		13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	HLA-DRA	P01903	254 aa		13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	NUDT17	P0C025	328 aa		13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	UNG	P13051	313 aa	Predicted RBP	13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	CENPC	Q03188	943 aa		13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	ODF2	Q5BJF6	829 aa		13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	TJAP1	Q5JTD0	557 aa		13.51	□□□□□ -0.25
SRSF5-215	ENST00000556587	NAA35	Q5VZE5	725 aa		13.51	□□□□□ -0.25

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