RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 NCOA4Q13772 614 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 WDR72Q3MJ13 1102 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 SLC39A12Q504Y0 691 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 C1orf220Q5T0J3 134 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 C15orf39Q6ZRI6 1047 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 GJD3Q8N144 294 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 TOP6BLQ8N6T0 577 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 OR10T2Q8NGX3 314 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 ELMO3Q96BJ8 720 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 ZNF707Q96C28 371 aaPredicted RBP18.35■□□□□ 0.53
PSEN1-217ENST00000556533 RTP3Q9BQQ7 232 aa18.35■□□□□ 0.53
PSEN1-217ENST00000556533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.35■□□□□ 0.53
PSEN1-217ENST00000556533 PDCD11Q14690 1871 aaKnown RBP18.35■□□□□ 0.53
PSEN1-217ENST00000556533 BRWD1Q9NSI6 2320 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 BICDL2A1A5D9 508 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 ACAT1P24752 427 aaKnown RBP18.34■□□□□ 0.53
PSEN1-217ENST00000556533 GPR17Q13304 367 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 SOWAHAQ2M3V2 549 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 SV2AQ7L0J3 742 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 TCEAL8Q8IYN2 117 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 ADGRF2Q8IZF7 708 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 TMEM86AQ8N2M4 240 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
PSEN1-217ENST00000556533 DUSP9Q99956 384 aaKnown RBP18.34■□□□□ 0.53
PSEN1-217ENST00000556533 CD320Q9NPF0 282 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 DDX43Q9NXZ2 648 aaKnown RBP18.34■□□□□ 0.53
PSEN1-217ENST00000556533 AFF4Q9UHB7 1163 aaKnown RBP18.34■□□□□ 0.53
PSEN1-217ENST00000556533 SLC27A5Q9Y2P5 690 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 ANK1P16157 1881 aa18.34■□□□□ 0.53
PSEN1-217ENST00000556533 XYLBO75191 536 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 VNN1O95497 513 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 LRG1P02750 347 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 HNRNPA1P09651 372 aaKnown RBP eCLIP18.33■□□□□ 0.52
PSEN1-217ENST00000556533 ATICP31939 592 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 TSPY1Q01534 308 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 PPP3CAQ08209 521 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 DUSP4Q13115 394 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 PAK1Q13153 545 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 ZNF699Q32M78 642 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 DCAF17Q5H9S7 520 aaPredicted RBP18.33■□□□□ 0.52
PSEN1-217ENST00000556533 TCERG1LQ5VWI1 586 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 GRASPQ7Z6J2 395 aaPredicted RBP18.33■□□□□ 0.52
PSEN1-217ENST00000556533 OSTM1Q86WC4 334 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 ATAD1Q8NBU5 361 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 MKNK1Q9BUB5 465 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 ZCWPW1Q9H0M4 648 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 SNX25Q9H3E2 840 aa18.33■□□□□ 0.52
PSEN1-217ENST00000556533 VWA8A3KMH1 1905 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 SLC16A3O15427 465 aaKnown RBP18.32■□□□□ 0.52
PSEN1-217ENST00000556533 HCRTO43612 131 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 HLA-DRAP01903 254 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 PDGFRBP09619 1106 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 PIK3CAP42336 1068 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 LHX1P48742 406 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 NTHL1P78549 312 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 MYL7Q01449 175 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 SGSM1Q2NKQ1 1148 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 ZACNQ401N2 412 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 TTI2Q6NXR4 508 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 CYP26C1Q6V0L0 522 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 LRRTM3Q86VH5 581 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 DCP1BQ8IZD4 617 aaKnown RBP18.32■□□□□ 0.52
PSEN1-217ENST00000556533 XYLT2Q9H1B5 865 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 ARMCX3Q9UH62 379 aaPredicted RBP18.32■□□□□ 0.52
PSEN1-217ENST00000556533 INSL5Q9Y5Q6 135 aa18.32■□□□□ 0.52
PSEN1-217ENST00000556533 TCF20Q9UGU0 1960 aaKnown RBP18.31■□□□□ 0.52
PSEN1-217ENST00000556533 TNFRSF10AO00220 468 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 STX10O60499 249 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 VNN2O95498 520 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 HOXA9P31269 272 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 GNL1P36915 607 aaPredicted RBP18.31■□□□□ 0.52
PSEN1-217ENST00000556533 TWF1Q12792 350 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 ZNF667Q5HYK9 610 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 SCARA5Q6ZMJ2 495 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 DPH6Q7L8W6 267 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
PSEN1-217ENST00000556533 MLKLQ8NB16 471 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 OR6B3Q8NGW1 331 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 CEP63Q96MT8 703 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 ACBD6Q9BR61 282 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 MRPL45Q9BRJ2 306 aaKnown RBP18.31■□□□□ 0.52
PSEN1-217ENST00000556533 PI4K2AQ9BTU6 479 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 WDR6Q9NNW5 1121 aaKnown RBP18.31■□□□□ 0.52
PSEN1-217ENST00000556533 HCFC1R1Q9NWW0 138 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 ABI2Q9NYB9 513 aaPredicted RBP18.31■□□□□ 0.52
PSEN1-217ENST00000556533 MAFFQ9ULX9 164 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 NR2E1Q9Y466 385 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 PLXNA3P51805 1871 aa18.31■□□□□ 0.52
PSEN1-217ENST00000556533 MTMR11A4FU01 709 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 C19orf67A6NJJ6 358 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 LOC730098B7Z3J9 87 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 SOAT2O75908 522 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 LMO2P25791 158 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 PCSK1P29120 753 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 ALDH1A3P47895 512 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 CDH8P55286 799 aa18.3■□□□□ 0.52
PSEN1-217ENST00000556533 RTL10Q7L3V2 364 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms