RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 XPO1O14980 1071 aaKnown RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 NIPSNAP2O75323 286 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 CILPO75339 1184 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 RPS17P08708 135 aaKnown RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 CHRNB1P11230 501 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 SELPP16109 830 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 CALB2P22676 271 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 MTIF2P46199 727 aaKnown RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 CCT5P48643 541 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 MLLT6P55198 1093 aaPredicted RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 POLE2P56282 527 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 CSNK2BP67870 215 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 KDSRQ06136 332 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 SCRN3Q0VDG4 424 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 STK4Q13043 487 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 GRM1Q13255 1194 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 XRCC4Q13426 336 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 PPP2R5DQ14738 602 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 ZNF124Q15973 351 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 ZNF362Q5T0B9 420 aaPredicted RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 C20orf194Q5TEA3 1177 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 C12orf60Q5U649 245 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 DAB2IPQ5VWQ8 1189 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 TPGS2Q68CL5 300 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 ANO5Q75V66 913 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 GALNT5Q7Z7M9 940 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 PASD1Q8IV76 773 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 MAP7D3Q8IWC1 876 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 ZNF565Q8N9K5 539 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 CEP70Q8NHQ1 597 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 CALML6Q8TD86 181 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 RASGRP4Q8TDF6 673 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 DDI1Q8WTU0 396 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 ANKS1AQ92625 1134 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 ARL8AQ96BM9 186 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 LENG1Q96BZ8 264 aaPredicted RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 GPRASP2Q96D09 838 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 SLC47A1Q96FL8 570 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 METTL2AQ96IZ6 378 aaKnown RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 MFSD14AQ96MC6 490 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 HAPLN3Q96S86 360 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 SDF4Q9BRK5 362 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 CENPKQ9BS16 269 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 ERP44Q9BS26 406 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 TMPRSS13Q9BYE2 586 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 UNKQ9C0B0 810 aaKnown RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 LRRC19Q9H756 370 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 NEK6Q9HC98 313 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 FAIMQ9NVQ4 179 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 GID8Q9NWU2 228 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 MRPL39Q9NYK5 338 aaKnown RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 FNIP2Q9P278 1114 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 EXTL2Q9UBQ6 330 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 COG5Q9UP83 839 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 AGAP1Q9UPQ3 857 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 DNM3Q9UQ16 869 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 CNTLNQ9NXG0 1405 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 NCOA2Q15596 1464 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 PHLPP2Q6ZVD8 1323 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CLIP1P30622 1438 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SH3D21A4FU49 640 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SYNDIG1LA6NDD5 238 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 FAM181BA6NEQ2 426 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CFAP73A6NFT4 308 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 STMND1H3BQB6 276 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 K7ELQ4 463 aaPredicted RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 N4BP3O15049 544 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CCNT1O60563 726 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 AOC2O75106 756 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ANP32DO95626 131 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 OXSR1O95747 527 aaPredicted RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 CRYZL1O95825 349 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SCGB1D2O95969 90 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 IFNA14P01570 189 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CHRNA1P02708 482 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 OPN1MWP04001 364 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ATP5BP06576 529 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 THEGLP0DJG4 465 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 OPN1MW2P0DN77 364 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 OPN1MW3P0DN78 364 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ALADP13716 330 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 TMEM11P17152 192 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 FUT4P22083 530 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 RPS6KB1P23443 525 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 JAK1P23458 1154 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 STAT6P42226 847 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CRKP46108 304 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 IFNAR2P48551 515 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SEPHS1P49903 392 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 GDI2P50395 445 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 CCNA1P78396 465 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 COG7P83436 770 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ARID5AQ03989 594 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 GFPT1Q06210 699 aaPredicted RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 SPAG1Q07617 926 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SMARCB1Q12824 385 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 LSAMPQ13449 338 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms