RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 MTMR11A4FU01 709 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 SRRM3A6NNA2 597 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-219ENST00000556432 M0QZQ0 153 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 EGFP01133 1207 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 OR52Z1P0C646 297 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 CDR1P51861 262 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 AMPD2Q01433 879 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 SPAG1Q07617 926 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
ACTN1-219ENST00000556432 UAP1L1Q3KQV9 507 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 TRIM68Q6AZZ1 485 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 OVOS1Q6IE37 1185 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 CENPPQ6IPU0 288 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 KIAA1211LQ6NV74 962 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 ARMCX5Q6P1M9 558 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 TMEM130Q8N3G9 435 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 ZBTB45Q96K62 511 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-219ENST00000556432 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 SCNM1Q9BWG6 230 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 EBF3Q9H4W6 596 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 TMEM134Q9H6X4 195 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 TMEM9BQ9NQ34 198 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 LHX6Q9UPM6 363 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 INVSQ9Y283 1065 aa15.16■□□□□ 0.02
ACTN1-219ENST00000556432 NUP210Q8TEM1 1887 aaPredicted RBP15.16■□□□□ 0.02
ACTN1-219ENST00000556432 BCLAF3A2AJT9 711 aaKnown RBP15.15■□□□□ 0.02
ACTN1-219ENST00000556432 KHNYNO15037 678 aaKnown RBP15.15■□□□□ 0.02
ACTN1-219ENST00000556432 SLC16A4O15374 487 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 HIP1RO75146 1068 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 APBB3O95704 486 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 CXCL8P10145 99 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 FDPSP14324 419 aaKnown RBP15.15■□□□□ 0.02
ACTN1-219ENST00000556432 U2AF2P26368 475 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACTN1-219ENST00000556432 CDC25CP30307 473 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 BFSP1Q12934 665 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 STRN3Q13033 797 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 PSMD2Q13200 908 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 RUNX3Q13761 415 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 SLC10A6Q3KNW5 377 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-219ENST00000556432 TAS1R3Q7RTX0 852 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 TTC16Q8NEE8 873 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 RPLP0P6Q8NHW5 317 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
ACTN1-219ENST00000556432 TRDMT1O14717 391 aaKnown RBP15.14■□□□□ 0.01
ACTN1-219ENST00000556432 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-219ENST00000556432 CEACAM1P13688 526 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 PROZP22891 400 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 AVPR1AP37288 418 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 DGKEP52429 567 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 RING1Q06587 406 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 MYBPC2Q14324 1141 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 ZNF174Q15697 407 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 MGAT5BQ3V5L5 792 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 CYP2U1Q7Z449 544 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 CMTM8Q8IZV2 173 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 NECAB1Q8N987 351 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 EXOC4Q96A65 974 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 DRC1Q96MC2 740 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 HPS4Q9NQG7 708 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 DDX19AQ9NUU7 478 aaKnown RBP15.14■□□□□ 0.01
ACTN1-219ENST00000556432 ARHGAP28Q9P2N2 729 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 KIAA1024Q9UPX6 916 aa15.14■□□□□ 0.01
ACTN1-219ENST00000556432 RBM19Q9Y4C8 960 aaKnown RBP15.14■□□□□ 0.01
ACTN1-219ENST00000556432 OTOL1A6NHN0 477 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-219ENST00000556432 SOBPA7XYQ1 873 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 ABLIM1O14639 778 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 TOM1L1O75674 476 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 LARGE1O95461 756 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 ODC1P11926 461 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 ARSAP15289 507 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 CSRP1P21291 193 aaKnown RBP15.13■□□□□ 0.01
ACTN1-219ENST00000556432 DRD1P21728 446 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 MUTP22033 750 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 WEE1P30291 646 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 DMC1Q14565 340 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 SAFBQ15424 915 aaKnown RBP eCLIP15.13■□□□□ 0.01
ACTN1-219ENST00000556432 ECM1Q16610 540 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 SLC39A12Q504Y0 691 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 LRSAM1Q6UWE0 723 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 MAB21L3Q8N8X9 362 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 DEFB124Q8NES8 71 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 GIPC2Q8TF65 315 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 GATA6Q92908 595 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 ACDQ96AP0 544 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 P2RY13Q9BPV8 354 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 TMEM121BQ9BXQ6 578 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-219ENST00000556432 SLC46A2Q9BY10 475 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 UBQLN1Q9UMX0 589 aaKnown RBP15.13■□□□□ 0.01
ACTN1-219ENST00000556432 WASF3Q9UPY6 502 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 AKAP13Q12802 2813 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 EML5Q05BV3 1969 aa15.13■□□□□ 0.01
ACTN1-219ENST00000556432 CLDN3O15551 220 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 XPOTO43592 962 aaKnown RBP15.12■□□□□ 0.01
ACTN1-219ENST00000556432 TYMPP19971 482 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 LRPAP1P30533 357 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 TUFMP49411 452 aaKnown RBP15.12■□□□□ 0.01
ACTN1-219ENST00000556432 GALK1P51570 392 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 GUCY2FP51841 1108 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 PPP2R3AQ06190 1150 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms