RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GSPT2Q8IYD1 628 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 SMC1BQ8NDV3 1235 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 RDM1Q8NG50 284 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 NSUN6Q8TEA1 469 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 NTPCRQ9BSD7 190 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 SYT17Q9BSW7 474 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 LRRC1Q9BTT6 524 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ZCWPW1Q9H0M4 648 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ACAD9Q9H845 621 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ZCCHC17Q9NP64 241 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 RBM12Q9NTZ6 932 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 MTRF1LQ9UGC7 380 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TUBGCP4Q9UGJ1 667 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 PPP2R3BQ9Y5P8 575 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 MYPNQ86TC9 1320 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TSPAN1O60635 241 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TIPRLO75663 272 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 POTEJP0CG39 1038 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ANXA13P27216 316 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 SLC8A3P57103 927 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 DYNC1I2Q13409 638 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CASP8Q14790 479 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ABHD15Q6UXT9 468 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 INTS8Q75QN2 995 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CBWD2Q8IUF1 395 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 GLYCTKQ8IVS8 523 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ARHGEF19Q8IW93 802 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 SKA1Q96BD8 255 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 CFAP36Q96G28 342 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 ACCSQ96QU6 501 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 HINFPQ9BQA5 517 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 TIPINQ9BVW5 301 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 EIF2AQ9BY44 585 aaKnown RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 JPH1Q9HDC5 661 aaPredicted RBP5.39□□□□□ -1.55
TMEM260-210ENST00000556422 GALNT8Q9NY28 637 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 DSEQ9UL01 958 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 NFASCO94856 1347 aa5.39□□□□□ -1.55
TMEM260-210ENST00000556422 SPATA31C2B4DYI2 1134 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 MAPK13O15264 365 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 N4BP1O75113 896 aaKnown RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 AGR2O95994 175 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GLULP15104 373 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 ATF7P17544 494 aaPredicted RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 CNGA1P29973 690 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GCLMP48507 274 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 VAMP7P51809 220 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 MAP3K7CLP57077 242 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 CNTN2Q02246 1040 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 CFAP157Q5JU67 520 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 HABP4Q5JVS0 413 aaKnown RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 FAM102BQ5T8I3 360 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GRAMD4Q6IC98 578 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM53Q6P2H8 277 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SLFN11Q7Z7L1 901 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 NLRX1Q86UT6 975 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 XXYLT1Q8NBI6 393 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 BBOF1Q8ND07 529 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 KAT5Q92993 513 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 FBXL18Q96ME1 805 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM117Q9H0C3 514 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 OSGEPQ9NPF4 335 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TAS2R14Q9NYV8 317 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 BTBD7Q9P203 1132 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TBX20Q9UMR3 447 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 PLXNA1Q9UIW2 1896 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 EVPLQ92817 2033 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SORBS3O60504 671 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 RTN2O75298 545 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 DDNO94850 711 aaPredicted RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GNAT1P11488 350 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 STAT1P42224 750 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 ACTR2P61160 394 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 DR1Q01658 176 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 PRKCEQ02156 737 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 KIF22Q14807 665 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SLC44A4Q53GD3 710 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TMTC4Q5T4D3 741 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SWSAP1Q6NVH7 229 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 LBX2Q6XYB7 198 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GRAMD2AQ8IUY3 354 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TPCN2Q8NHX9 752 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 NPLOC4Q8TAT6 608 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 CAGE1Q8TC20 777 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 ABHD8Q96I13 439 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 MRPL46Q9H2W6 279 aaKnown RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 NDFIP2Q9NV92 336 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SLC9A2Q9UBY0 812 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 VTI1BQ9UEU0 232 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TMEM59LQ9UK28 342 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 USP20Q9Y2K6 914 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SYNGAP1Q96PV0 1343 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 DENND3A2RUS2 1198 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 ADM5C9JUS6 153 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 PMM2O15305 246 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 DNAJC6O75061 913 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 ZNF254O75437 659 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 RNF8O76064 485 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TMCC1O94876 653 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TUBBP07437 444 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms