RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 MAPRE3Q9UPY8 281 aa4.62□□□□□ -1.67
SCFD1-218ENST00000556256 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 MYO1FO00160 1098 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 SLC43A1O75387 559 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 MYCLP1P12525 358 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-218ENST00000556256 OSMP13725 252 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 GPR3P46089 330 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 LINC00205P59089 165 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 MIDNQ504T8 468 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 PXDC1Q5TGL8 231 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 TAPT1Q6NXT6 567 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 ZNF551Q7Z340 670 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-218ENST00000556256 POC1BQ8TC44 478 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 TRIB1Q96RU8 372 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 PIF1Q9H611 641 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 SPATA31A3Q5VYP0 1347 aa4.61□□□□□ -1.67
SCFD1-218ENST00000556256 CYP2D7A0A087X1C5 515 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 MYMKA6NI61 221 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 ADAMTS3O15072 1205 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 DNAJB5O75953 348 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 NDUFB7P17568 137 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 MTNR1BP49286 362 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 PLCD1P51178 756 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 TARDBPQ13148 414 aaKnown RBP eCLIP4.6□□□□□ -1.67
SCFD1-218ENST00000556256 DAZAP2Q15038 168 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-218ENST00000556256 TBCCQ15814 346 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 CATSPERGQ6ZRH7 1159 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 ZNF365Q70YC5 407 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 DDX46Q7L014 1031 aaKnown RBP4.6□□□□□ -1.67
SCFD1-218ENST00000556256 SLC29A4Q7RTT9 530 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 FANCBQ8NB91 859 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 SSH1Q8WYL5 1049 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 RAB24Q969Q5 203 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 ARHGEF3Q9NR81 526 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 WWOXQ9NZC7 414 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 INTUQ9ULD6 942 aa4.6□□□□□ -1.67
SCFD1-218ENST00000556256 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-218ENST00000556256 TRIAP1O43715 76 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 CDC45O75419 566 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 ARHGAP25P42331 645 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 STRN3Q13033 797 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 TRIP6Q15654 476 aaKnown RBP4.59□□□□□ -1.67
SCFD1-218ENST00000556256 GALNT16Q8N428 558 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 SREK1Q8WXA9 508 aaKnown RBP4.59□□□□□ -1.67
SCFD1-218ENST00000556256 TBC1D5Q92609 795 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 TMX3Q96JJ7 454 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 SLC2A13Q96QE2 648 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 OSBPL9Q96SU4 736 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 PACSIN1Q9BY11 444 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 ACTRT3Q9BYD9 372 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 APOBEC2Q9Y235 224 aaKnown RBP4.59□□□□□ -1.67
SCFD1-218ENST00000556256 AFG3L2Q9Y4W6 797 aa4.59□□□□□ -1.67
SCFD1-218ENST00000556256 CYSRT1A8MQ03 144 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 E9PLN8 166 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 LRRC41Q15345 812 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 SLC30A10Q6XR72 485 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 RSPH3Q86UC2 560 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 CNGA4Q8IV77 575 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 IFI44Q8TCB0 444 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 NRG4Q8WWG1 115 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 SMOQ99835 787 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 VKORC1Q9BQB6 163 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 C14orf119Q9NWQ9 140 aa4.58□□□□□ -1.68
SCFD1-218ENST00000556256 POLRMTO00411 1230 aaKnown RBP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 LPOP22079 712 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 NDUFV1P49821 464 aa4.57□□□□□ -1.68
SCFD1-218ENST00000556256 ZNF280AP59817 542 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 AARS2Q5JTZ9 985 aaKnown RBP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 DLK2Q6UY11 383 aa4.57□□□□□ -1.68
SCFD1-218ENST00000556256 MEPCEQ7L2J0 689 aaKnown RBP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 IRF2BP2Q7Z5L9 587 aa4.57□□□□□ -1.68
SCFD1-218ENST00000556256 STRA8Q7Z7C7 330 aa4.57□□□□□ -1.68
SCFD1-218ENST00000556256 KIAA0907Q7Z7F0 614 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 CHSY1Q86X52 802 aa4.57□□□□□ -1.68
SCFD1-218ENST00000556256 C5orf34Q96MH7 638 aa4.57□□□□□ -1.68
SCFD1-218ENST00000556256 SMOC2Q9H3U7 446 aa4.57□□□□□ -1.68
SCFD1-218ENST00000556256 CCM2LQ9NUG4 571 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCFD1-218ENST00000556256 IGSF3O75054 1194 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 Q4G0T1 1027 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 KIAA1161Q6NSJ0 714 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 ANKRD16Q6P6B7 361 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 RNF180Q86T96 592 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 NANOGP1Q8N7R0 232 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 NRACQ8N912 160 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 C8orf58Q8NAV2 365 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 SMRP1Q8NCR6 262 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 NSMCE1Q8WV22 266 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 PDGFCQ9NRA1 345 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 TDP1Q9NUW8 608 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 PCDHA13Q9Y5I0 950 aa4.56□□□□□ -1.68
SCFD1-218ENST00000556256 H0YIZ8 118 aa4.55□□□□□ -1.68
SCFD1-218ENST00000556256 SOCS2O14508 198 aa4.55□□□□□ -1.68
SCFD1-218ENST00000556256 NXPH3O95157 252 aa4.55□□□□□ -1.68
SCFD1-218ENST00000556256 WASP42768 502 aa4.55□□□□□ -1.68
SCFD1-218ENST00000556256 ALDH9A1P49189 494 aa4.55□□□□□ -1.68
SCFD1-218ENST00000556256 RBM20Q5T481 1227 aaKnown RBP4.55□□□□□ -1.68
SCFD1-218ENST00000556256 AOPEPQ8N6M6 819 aa4.55□□□□□ -1.68
SCFD1-218ENST00000556256 UBR7Q8N806 425 aa4.55□□□□□ -1.68
SCFD1-218ENST00000556256 PPM1NQ8N819 430 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms