RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 KRT39Q6A163 491 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 PDE12Q6L8Q7 609 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 SV2AQ7L0J3 742 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 RNF169Q8NCN4 708 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 CXorf38Q8TB03 319 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 PPP1R10Q96QC0 940 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 ERGIC2Q96RQ1 377 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 TSPAN18Q96SJ8 248 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 GAD1Q99259 594 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 MMRN2Q9H8L6 949 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 UBN1Q9NPG3 1134 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 SIK3Q9Y2K2 1263 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 COQ4Q9Y3A0 265 aa12.63□□□□□ -0.39
MTHFD1-211ENST00000555709 SMIM28A0A1B0GU29 152 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 PES1O00541 588 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 VNN1O95497 513 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 SP9P0CG40 484 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 CDC25BP30305 580 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 TFAMQ00059 246 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 UBXN1Q04323 297 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 NAB2Q15742 525 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 DPY19L2P1Q6NXN4 242 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 LLGL2Q6P1M3 1020 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 NPAS4Q8IUM7 802 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 VSTM4Q8IW00 320 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 TMEM130Q8N3G9 435 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 C1orf127Q8N9H9 656 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 TAS1R2Q8TE23 839 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 RIN2Q8WYP3 895 aaPredicted RBP12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 TUBGCP4Q9UGJ1 667 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 CACNA1IQ9P0X4 2223 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
MTHFD1-211ENST00000555709 ASPMQ8IZT6 3477 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SCN1AP35498 2009 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 DCDC2BA2VCK2 349 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 OFD1O75665 1012 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 FGF18O76093 207 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 TNNC2P02585 160 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 FGFR1P11362 822 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 IBSPP21815 317 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 KLK7P49862 253 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SCNN1GP51170 649 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 ITIH3Q06033 890 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SOX4Q06945 474 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 KCNMA1Q12791 1236 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SYCP1Q15431 976 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SCARA3Q6AZY7 606 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 ZC3H14Q6PJT7 736 aaKnown RBP12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 GLB1LQ6UWU2 654 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 TRAPPC11Q7Z392 1133 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SIX5Q8N196 739 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 TDRD5Q8NAT2 981 aaKnown RBP12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 LMO3Q8TAP4 145 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 HELQQ8TDG4 1101 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SEMA4DQ92854 862 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 C18orf25Q96B23 403 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 ANKRD36BP1Q96IX9 119 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 RPS6KC1Q96S38 1066 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 CRACR2AQ9BSW2 395 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 SIX4Q9UIU6 781 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 UBQLN1Q9UMX0 589 aaKnown RBP12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 USTQ9Y2C2 406 aa12.61□□□□□ -0.39
MTHFD1-211ENST00000555709 FRYQ5TBA9 3013 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 DENND4AQ7Z401 1863 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 HIDE1A8MVS5 230 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 ZZEF1O43149 2961 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 LRRN2O75325 713 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 CYP3A5P20815 502 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 PON1P27169 355 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 MTHFRP42898 656 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 GUCY2FP51841 1108 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 GRIK3Q13003 919 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 BIRC3Q13489 604 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 CES5AQ6NT32 575 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 FBXL13Q8NEE6 735 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 CACTINQ8WUQ7 758 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 RSPH1Q8WYR4 309 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 CASP10Q92851 521 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 RTKNQ9BST9 563 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 INTS2Q9H0H0 1204 aaKnown RBP12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 SIX2Q9NPC8 291 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 SLC38A7Q9NVC3 462 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 DPP3Q9NY33 737 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 DUSP12Q9UNI6 340 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 PCDHB7Q9Y5E2 793 aa12.6□□□□□ -0.39
MTHFD1-211ENST00000555709 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms