RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 HUS1O60921 280 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 PRPF40AO75400 957 aaKnown RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 ITGB3P05106 788 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 TMEM191BP0C7N4 346 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 CEBPBP17676 345 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 WEE1P30291 646 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 WNT7BP56706 349 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 GPC5P78333 572 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 TCHHQ07283 1943 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 MYO1EQ12965 1108 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 NFE2Q16621 373 aaPredicted RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 DUOXA2Q1HG44 320 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 FOXD4L6Q3SYB3 417 aaPredicted RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 WSCD1Q658N2 575 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 FOXD4L3Q6VB84 417 aaPredicted RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 CCDC105Q8IYK2 499 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 TOP6BLQ8N6T0 577 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 GLIS3Q8NEA6 775 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 ZSWIM2Q8NEG5 633 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 FLCNQ8NFG4 579 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 OR10T2Q8NGX3 314 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 SCFD1Q8WVM8 642 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 DNASE1L2Q92874 299 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 SMARCD2Q92925 531 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 HPS3Q969F9 1004 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 PSMG2Q969U7 264 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 MCRS1Q96EZ8 462 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 ASB16Q96NS5 453 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 RPP25Q9BUL9 199 aaKnown RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 DDX23Q9BUQ8 820 aaKnown RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 LRRC3Q9BY71 257 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 OSBPL6Q9BZF3 934 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 DNAJC25Q9H1X3 360 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 CRISPLD1Q9H336 500 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 PCIF1Q9H4Z3 704 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 ZFP14Q9HCL3 533 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 PDE11AQ9HCR9 933 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 TRPV5Q9NQA5 729 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 AGPAT3Q9NRZ7 376 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 AGAP1Q9UPQ3 857 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 HPSEQ9Y251 543 aa12.75□□□□□ -0.37
VRK1-204ENST00000555351 R3HCC1Q9Y3T6 440 aaKnown RBP12.75□□□□□ -0.37
VRK1-204ENST00000555351 GOLGA8IPA6NC78 632 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 GOLGA8JA6NMD2 632 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 SOBPA7XYQ1 873 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 MOSPD3O75425 235 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 TNNC2P02585 160 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 FAM163BP0C2L3 166 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 OR4Q2P0C623 313 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 CCR2P41597 374 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 LHX1P48742 406 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 TSPY1Q01534 308 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 PSMD6Q15008 389 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 SNRNP35Q16560 246 aaKnown RBP12.74□□□□□ -0.37
VRK1-204ENST00000555351 KNOP1Q1ED39 458 aaKnown RBP12.74□□□□□ -0.37
VRK1-204ENST00000555351 SLC39A12Q504Y0 691 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 LIMS2Q7Z4I7 341 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 TMC8Q8IU68 726 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 XXYLT1Q8NBI6 393 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 ATAD1Q8NBU5 361 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 ING5Q8WYH8 240 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 PAGE5Q96GU1 130 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 NELL2Q99435 816 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 TBC1D17Q9HA65 648 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 ZDHHC9Q9Y397 364 aa12.74□□□□□ -0.37
VRK1-204ENST00000555351 A0A1W2PQ27 194 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 A0A1W2PQ64 194 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 A0A1W2PQD8 194 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 PROB1E7EW31 1015 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 GABRDO14764 452 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 HAPLN1P10915 354 aaPredicted RBP12.73□□□□□ -0.37
VRK1-204ENST00000555351 PFKFB1P16118 471 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 RFX1P22670 979 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 FCARP24071 287 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 PCSK1P29120 753 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 MAGEA9P43362 315 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 AFMP43652 599 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 MLLT6P55198 1093 aaPredicted RBP12.73□□□□□ -0.37
VRK1-204ENST00000555351 MYL7Q01449 175 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 CUL4BQ13620 913 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 BECN1Q14457 450 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 VEPH1Q14D04 833 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 FAM78AQ5JUQ0 283 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 DNAJB7Q7Z6W7 309 aaPredicted RBP12.73□□□□□ -0.37
VRK1-204ENST00000555351 CBWD2Q8IUF1 395 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 SLC9A9Q8IVB4 645 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 DTWD2Q8NBA8 298 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 SHKBP1Q8TBC3 707 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 DEPDC1BQ8WUY9 529 aa12.73□□□□□ -0.37
VRK1-204ENST00000555351 TCEAL4Q96EI5 215 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms