RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 NT5C1BQ96P26 610 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 RTP3Q9BQQ7 232 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 CLSTN3Q9BQT9 956 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 ACBD6Q9BR61 282 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 CRACR2AQ9BSW2 395 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 INTS2Q9H0H0 1204 aaKnown RBP13.58□□□□□ -0.24
SYNE2-219ENST00000555323 SDCBP2Q9H190 292 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 SIX2Q9NPC8 291 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 PLCB1Q9NQ66 1216 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 ENTPD7Q9NQZ7 604 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.24
SYNE2-219ENST00000555323 PLXNA4Q9HCM2 1894 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 A0A1W2PQC6 194 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 OR6C75A6NL08 312 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 HIDE1A8MVS5 230 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 PES1O00541 588 aaKnown RBP13.57□□□□□ -0.24
SYNE2-219ENST00000555323 TEX33O43247 280 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 CNPP09543 421 aaKnown RBP13.57□□□□□ -0.24
SYNE2-219ENST00000555323 GNL1P36915 607 aaPredicted RBP13.57□□□□□ -0.24
SYNE2-219ENST00000555323 CDH8P55286 799 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 INCA1Q0VD86 236 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 CUL2Q13617 745 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 PSMD5Q16401 504 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 ZNF280DQ6N043 979 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 SARM1Q6SZW1 724 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 PRSS55Q6UWB4 352 aaPredicted RBP13.57□□□□□ -0.24
SYNE2-219ENST00000555323 RSPO2Q6UXX9 243 aaPredicted RBP13.57□□□□□ -0.24
SYNE2-219ENST00000555323 ENOSF1Q7L5Y1 443 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 UNC93AQ86WB7 457 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 OSTM1Q86WC4 334 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 ADGRF2Q8IZF7 708 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 KLHL5Q96PQ7 755 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 CDX2Q99626 313 aaPredicted RBP13.57□□□□□ -0.24
SYNE2-219ENST00000555323 MRPL45Q9BRJ2 306 aaKnown RBP13.57□□□□□ -0.24
SYNE2-219ENST00000555323 SMYD3Q9H7B4 428 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 MTMR10Q9NXD2 777 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 APEX2Q9UBZ4 518 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 FBXL5Q9UKA1 691 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 STXBP5LQ9Y2K9 1186 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 NME7Q9Y5B8 376 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 MTCH2Q9Y6C9 303 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 CDH23Q9H251 3354 aa13.57□□□□□ -0.24
SYNE2-219ENST00000555323 C2CD2LO14523 706 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 TEX28O15482 410 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 WEE2P0C1S8 567 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 LMO2P25791 158 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 LRMPQ12912 555 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 RAB33AQ14088 237 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 CTXN3Q4LDR2 81 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 KLHDC7AQ5VTJ3 777 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 PLPP4Q5VZY2 271 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 Q7L0L9 218 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 ARHGEF19Q8IW93 802 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 CRYBG2Q8N1P7 616 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 DEFB123Q8N688 67 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 UBR7Q8N806 425 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 AUTS2Q8WXX7 1259 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 FAM161BQ96MY7 647 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 EMILIN2Q9BXX0 1053 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.56□□□□□ -0.24
SYNE2-219ENST00000555323 DDX43Q9NXZ2 648 aaKnown RBP13.56□□□□□ -0.24
SYNE2-219ENST00000555323 BARX2Q9UMQ3 279 aaPredicted RBP13.56□□□□□ -0.24
SYNE2-219ENST00000555323 CNTN6Q9UQ52 1028 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 DAAM1Q9Y4D1 1078 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 PCDHGC5Q9Y5F6 944 aa13.56□□□□□ -0.24
SYNE2-219ENST00000555323 MYO9BQ13459 2157 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 VWA8A3KMH1 1905 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.55□□□□□ -0.24
SYNE2-219ENST00000555323 CILPO75339 1184 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 NOL4O94818 638 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 ABLIM3O94929 683 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 ACO1P21399 889 aaKnown RBP13.55□□□□□ -0.24
SYNE2-219ENST00000555323 RFX1P22670 979 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 PCSK1P29120 753 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 PBX1P40424 430 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 NDUFV1P49821 464 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 GPR17Q13304 367 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 KCNC3Q14003 757 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 SYCP1Q15431 976 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 DUSP6Q16828 381 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 FAM171BQ6P995 826 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 LILRA6Q6PI73 481 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 RRAGAQ7L523 313 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 PPFIBP1Q86W92 1011 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 PPM1KQ8N3J5 372 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 OR6B3Q8NGW1 331 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 OR10T2Q8NGX3 314 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 ZNF461Q8TAF7 563 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 WHAMMQ8TF30 809 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 KREMEN1Q96MU8 473 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 GAS2L1Q99501 681 aaPredicted RBP13.55□□□□□ -0.24
SYNE2-219ENST00000555323 CDCA3Q99618 268 aaPredicted RBP13.55□□□□□ -0.24
SYNE2-219ENST00000555323 PKMYT1Q99640 499 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 NAA15Q9BXJ9 866 aaKnown RBP13.55□□□□□ -0.24
SYNE2-219ENST00000555323 ZCWPW1Q9H0M4 648 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 SNX25Q9H3E2 840 aa13.55□□□□□ -0.24
SYNE2-219ENST00000555323 NSUN3Q9H649 340 aaKnown RBP13.55□□□□□ -0.24
SYNE2-219ENST00000555323 UBE2TQ9NPD8 197 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms