RNA–Protein interactions for RNA: ENST00000555306.5

APEX1-209, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 898 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-209ENST00000555306 SDCBP2Q9H190 292 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 MARCH5Q9NX47 278 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 PCDHB12Q9Y5F1 795 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
APEX1-209ENST00000555306 PDE4DIPQ5VU43 2346 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 NLRC5Q86WI3 1866 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 VWA8A3KMH1 1905 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 ITGB1P05556 798 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 RB1P06400 928 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 PTMAP06454 111 aaKnown RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 PCSK1P29120 753 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 GNL1P36915 607 aaPredicted RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 RAD23BP54727 409 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 CDH8P55286 799 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 MRPL58Q14197 206 aaKnown RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 STILQ15468 1287 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 FUT10Q6P4F1 479 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 TMEM139Q8IV31 216 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 ADGRF2Q8IZF7 708 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 RBBP8NLQ8NC74 664 aaPredicted RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 WHAMMQ8TF30 809 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 TMEM176AQ96HP8 235 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 TNIP3Q96KP6 325 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 ACBD6Q9BR61 282 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 SNX25Q9H3E2 840 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.8□□□□□ -0.362e-7■■■■□ 22
APEX1-209ENST00000555306 CACNG4Q9UBN1 327 aa12.8□□□□□ -0.36
APEX1-209ENST00000555306 PRG3Q9Y2Y8 225 aaPredicted RBP12.8□□□□□ -0.36
APEX1-209ENST00000555306 GBF1Q92538 1859 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 CYP26A1O43174 497 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 CLSTN1O94985 981 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 KRT5P13647 590 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 IGFBP6P24592 240 aaPredicted RBP12.79□□□□□ -0.36
APEX1-209ENST00000555306 BRCC3P46736 316 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 NDST1P52848 882 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 KLHL30Q0D2K2 578 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
APEX1-209ENST00000555306 WSCD1Q658N2 575 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 E4F1Q66K89 784 aaPredicted RBP12.79□□□□□ -0.36
APEX1-209ENST00000555306 SCARA5Q6ZMJ2 495 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 DDX53Q86TM3 631 aaKnown RBP12.79□□□□□ -0.36
APEX1-209ENST00000555306 THEM5Q8N1Q8 247 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 SLC4A11Q8NBS3 891 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 ELMO3Q96BJ8 720 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 TMEM169Q96HH4 297 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 BAG1Q99933 345 aaPredicted RBP12.79□□□□□ -0.36
APEX1-209ENST00000555306 MRPL45Q9BRJ2 306 aaKnown RBP12.79□□□□□ -0.36
APEX1-209ENST00000555306 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 CHST7Q9NS84 486 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 LZTS1Q9Y250 596 aa12.79□□□□□ -0.36
APEX1-209ENST00000555306 A8MXQ7 604 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 H7C4K7 107 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 ARHGAP6O43182 974 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 MED7O43513 233 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 SOD2P04179 222 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 VDRP11473 427 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 CYP11B1P15538 503 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 CD58P19256 250 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 BMPR1AP36894 532 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 USP8P40818 1118 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 KRT17Q04695 432 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
APEX1-209ENST00000555306 UBE3AQ05086 875 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
APEX1-209ENST00000555306 RAB30Q15771 203 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 CNGA2Q16280 664 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
APEX1-209ENST00000555306 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 PPP1R2P3Q6NXS1 205 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 VPS36Q86VN1 386 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 OR6B3Q8NGW1 331 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 EPS8L1Q8TE68 723 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 DDX1Q92499 740 aaKnown RBP12.78□□□□□ -0.36
APEX1-209ENST00000555306 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 TTPALQ9BTX7 342 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 HERC2P3Q9BVR0 1158 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 ELOVL4Q9GZR5 314 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 HAUS4Q9H6D7 363 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 ARHGAP20Q9P2F6 1191 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 HCSTQ9UBK5 93 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 NOCTQ9UK39 431 aaKnown RBP12.78□□□□□ -0.36
APEX1-209ENST00000555306 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
APEX1-209ENST00000555306 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
APEX1-209ENST00000555306 LINC01553A4QN01 128 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms