RNA–Protein interactions for RNA: ENST00000554929.1

SRSF5-208, Transcript of serine and arginine rich splicing factor 5, human

TSL 2

Gene SRSF5, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-208	ENST00000554929	C10orf76	Q5T2E6	689 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	SFMBT2	Q5VUG0	894 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	PRR23B	Q6ZRT6	265 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	RRAGA	Q7L523	313 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	VPS52	Q8N1B4	723 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	RNF10	Q8N5U6	811 aa	Known RBP	11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	SCFD1	Q8WVM8	642 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	NXPE3	Q969Y0	559 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	ACBD3	Q9H3P7	528 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	RGS18	Q9NS28	235 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	GINS2	Q9Y248	185 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	MTF2	Q9Y483	593 aa	Predicted RBP	11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	JRKL	Q9Y4A0	524 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	DAAM1	Q9Y4D1	1078 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	PCDHA13	Q9Y5I0	950 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929	PATJ	Q8NI35	1801 aa		11.18	□□□□□ -0.62
SRSF5-208	ENST00000554929		A0A0U1RQJ8	604 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	TARSL2	A2RTX5	802 aa	Known RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	LRRC53	A6NM62	1247 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	FAM170B	A6NMN3	283 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929		C9IYK1	514 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	FAM86B1	E9PN63	330 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	EIF3D	O15371	548 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	MSH4	O15457	936 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	HOXA2	O43364	376 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	RPLP2	P05387	115 aa	Known RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	RET	P07949	1114 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	FAM86B2	P0C5J1	330 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	SPATA31C1	P0DKV0	1188 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	TCF7	P36402	384 aa	Predicted RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	EIF4A3	P38919	411 aa	Known RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	KLK7	P49862	253 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	MMP16	P51512	607 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	HSD17B4	P51659	736 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	PPP2R5C	Q13362	524 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	NFIL3	Q16649	462 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	GNPTAB	Q3T906	1256 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	ARSH	Q5FYA8	562 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	LAIR1	Q6GTX8	287 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	WDR93	Q6P2C0	686 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	HDX	Q7Z353	690 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	FMNL3	Q8IVF7	1028 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	ABI1	Q8IZP0	508 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	SLC39A11	Q8N1S5	342 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	BAP1	Q92560	729 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	SLC5A5	Q92911	643 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	CASD1	Q96PB1	797 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	MYADM	Q96S97	322 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	TMEM117	Q9H0C3	514 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	PLCB1	Q9NQ66	1216 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	OLFML3	Q9NRN5	406 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	TMEM161A	Q9NX61	479 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	MAP3K20	Q9NYL2	800 aa	Known RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	ARHGAP20	Q9P2F6	1191 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	VAV3	Q9UKW4	847 aa		11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	BZW2	Q9Y6E2	419 aa	Known RBP	11.17	□□□□□ -0.62
SRSF5-208	ENST00000554929	ATP8B3	O60423	1300 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	IGLV3-22	A0A075B6J6	115 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	OPLAH	O14841	1288 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	LRP3	O75074	770 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	RPS6KA5	O75582	802 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	TCP1	P17987	556 aa	Known RBP	11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	NR2F2	P24468	414 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	MAGEA1	P43355	309 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	USP46	P62068	366 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	KRT76	Q01546	638 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	KCNMA1	Q12791	1236 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	CSRP2	Q16527	193 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	LONRF2	Q1L5Z9	754 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	NIPA1	Q7RTP0	329 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	LRRC43	Q8N309	656 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	NELL1	Q92832	810 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	EEF2KMT	Q96G04	330 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	TMEM169	Q96HH4	297 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	NACC1	Q96RE7	527 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	ZHX3	Q9H4I2	956 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	ANKZF1	Q9H8Y5	726 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	SLC2A4RG	Q9NR83	387 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	ERAP1	Q9NZ08	941 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	AIPL1	Q9NZN9	384 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	EPS15L1	Q9UBC2	864 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	RNF14	Q9UBS8	474 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	ODF2L	Q9ULJ1	636 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	NOC2L	Q9Y3T9	749 aa	Known RBP	11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	ZFYVE26	Q68DK2	2539 aa		11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	SETX	Q7Z333	2677 aa	Known RBP	11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	CNOT1	A5YKK6	2376 aa	Known RBP	11.16	□□□□□ -0.62
SRSF5-208	ENST00000554929	COL4A3	Q01955	1670 aa		11.15	□□□□□ -0.62
SRSF5-208	ENST00000554929	GTPBP10	A4D1E9	387 aa	Known RBP	11.15	□□□□□ -0.62
SRSF5-208	ENST00000554929	RRN3P2	A6NIE6	340 aa		11.15	□□□□□ -0.62
SRSF5-208	ENST00000554929	SPATA31C2	B4DYI2	1134 aa		11.15	□□□□□ -0.62
SRSF5-208	ENST00000554929	TAF4	O00268	1085 aa		11.15	□□□□□ -0.62
SRSF5-208	ENST00000554929	PSMD10	O75832	226 aa		11.15	□□□□□ -0.62
SRSF5-208	ENST00000554929	DGAT1	O75907	488 aa		11.15	□□□□□ -0.62
SRSF5-208	ENST00000554929	FAM13A	O94988	1023 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms