RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCFD1-214ENST00000554819 A0A087X1B8 175 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 ZFPL1O95159 310 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 AGFG1P52594 562 aaKnown RBP5.06□□□□□ -1.6
SCFD1-214ENST00000554819 EXOSC9Q06265 439 aaKnown RBP5.06□□□□□ -1.6
SCFD1-214ENST00000554819 SCAPQ12770 1279 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 TCF15Q12870 199 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 AMOTQ4VCS5 1084 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 CRB2Q5IJ48 1285 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 HECTD2Q5U5R9 776 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 Q6YL49 198 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 Q6ZPA2 131 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 MICALCLQ6ZW33 695 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 FMNL3Q8IVF7 1028 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 LNX2Q8N448 690 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 NSUN7Q8NE18 718 aaKnown RBP5.06□□□□□ -1.6
SCFD1-214ENST00000554819 PLBD2Q8NHP8 589 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 LINC00476Q8WZB0 136 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 SNX19Q92543 992 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 SLC9A6Q92581 669 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 TMEM125Q96AQ2 219 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 LRFN3Q9BTN0 628 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 TINAGL1Q9GZM7 467 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-214ENST00000554819 TMEM60Q9H2L4 133 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 FAM204AQ9H8W3 233 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 SYBUQ9NX95 663 aa5.06□□□□□ -1.6
SCFD1-214ENST00000554819 SPATA31A3Q5VYP0 1347 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 A0A1W2PPL8 197 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 GRID2IPA4D2P6 1211 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 FAM227AF5H4B4 570 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 KIF20AO95235 890 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 ESRRBO95718 433 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 THP07101 528 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 SRGNP10124 158 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 KRT4P19013 534 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 HDCP19113 662 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 FSTL1Q12841 308 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 MPP3Q13368 585 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 CD300EQ496F6 205 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-214ENST00000554819 FAM160B1Q5W0V3 765 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 NPNTQ6UXI9 565 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 SLC30A10Q6XR72 485 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 OVCH2Q7RTZ1 564 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 TMPRSS9Q7Z410 1059 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 TSR2Q969E8 191 aaKnown RBP5.05□□□□□ -1.6
SCFD1-214ENST00000554819 CHFRQ96EP1 664 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 LRIG1Q96JA1 1093 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 Q96MF0 132 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 ETAA1Q9NY74 926 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 VSX1Q9NZR4 365 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-214ENST00000554819 CPA4Q9UI42 421 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 AGAP1Q9UPQ3 857 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 PLEKHM1Q9Y4G2 1056 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 RAD54BQ9Y620 910 aa5.05□□□□□ -1.6
SCFD1-214ENST00000554819 MAST3O60307 1309 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 CAPN8A6NHC0 703 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 M0QYG6 137 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 TRIAP1O43715 76 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 ITGALP20701 1170 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 NPTX2P47972 431 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 MAEAQ7L5Y9 396 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 SRGAP1Q7Z6B7 1085 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 ADGRG5Q8IZF4 528 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 PCSK9Q8NBP7 692 aaKnown RBP5.04□□□□□ -1.6
SCFD1-214ENST00000554819 PSD4Q8NDX1 1056 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 BEND2Q8NDZ0 799 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 SSH3Q8TE77 659 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 MOGAT1Q96PD6 335 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 HEPHQ9BQS7 1158 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 AIFM2Q9BRQ8 373 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 B3GNT5Q9BYG0 378 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 IKZF4Q9H2S9 585 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 PRDM11Q9NQV5 511 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 KCTD5Q9NXV2 234 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 STAP2Q9UGK3 403 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 MED16Q9Y2X0 877 aa5.04□□□□□ -1.6
SCFD1-214ENST00000554819 EPN1Q9Y6I3 576 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-214ENST00000554819 F5H697 171 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 PHGDHO43175 533 aaKnown RBP5.03□□□□□ -1.6
SCFD1-214ENST00000554819 PEX1O43933 1283 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 VPS4BO75351 444 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 MYBP10242 640 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 PIM1P11309 404 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-214ENST00000554819 ATF3P18847 181 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 GATA3P23771 443 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 SEC24CP53992 1094 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 TAF2Q6P1X5 1199 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 Q6ZNX1 250 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 PPP1R32Q7Z5V6 425 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 C14orf80Q86SX3 495 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 WDR75Q8IWA0 830 aaKnown RBP5.03□□□□□ -1.6
SCFD1-214ENST00000554819 KIAA0319LQ8IZA0 1049 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 FAM9AQ8IZU1 332 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-214ENST00000554819 FAM46DQ8NEK8 389 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 TTC8Q8TAM2 541 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 MRGPRX1Q96LB2 322 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 OSBPL9Q96SU4 736 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 L1RE1Q9UN81 338 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 DMRT1Q9Y5R6 373 aa5.03□□□□□ -1.6
SCFD1-214ENST00000554819 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms