RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 BDP1A6H8Y1 2624 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 GOLGA6L22H0YM25 854 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 PAPLNO95428 1278 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 C4BPAP04003 597 aaKnown RBP24.99■■□□□ 1.59
NEK9-203ENST00000553945 CCNE1P24864 410 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 HOXA9P31269 272 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 MUC3AQ02505 3323 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 LRRC63Q05C16 580 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 GPR17Q13304 367 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 TDRD10Q5VZ19 366 aaKnown RBP24.99■■□□□ 1.59
NEK9-203ENST00000553945 RTL10Q7L3V2 364 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 TCEAL8Q8IYN2 117 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 TMEM86AQ8N2M4 240 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 TOP6BLQ8N6T0 577 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 POLIQ9UNA4 740 aa24.99■■□□□ 1.59
NEK9-203ENST00000553945 DENND4AQ7Z401 1863 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 LOC730098B7Z3J9 87 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 PPP1R3GB7ZBB8 358 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 XYLBO75191 536 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 CLSTN1O94985 981 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 TRIM49P0CI25 452 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 TRIM49CP0CI26 452 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 EPB41P11171 864 aaKnown RBP24.98■■□□□ 1.59
NEK9-203ENST00000553945 MYL6P60660 151 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 FKBP3Q00688 224 aaKnown RBP24.98■■□□□ 1.59
NEK9-203ENST00000553945 C1orf220Q5T0J3 134 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 ADGRF2Q8IZF7 708 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 MKNK1Q9BUB5 465 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 ZCWPW1Q9H0M4 648 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 NR2E1Q9Y466 385 aa24.98■■□□□ 1.59
NEK9-203ENST00000553945 IKBKBO14920 756 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 LRG1P02750 347 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 NCOA4Q13772 614 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 SOWAHAQ2M3V2 549 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 SLC39A12Q504Y0 691 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 GRASPQ7Z6J2 395 aaPredicted RBP24.97■■□□□ 1.59
NEK9-203ENST00000553945 TRIML1Q8N9V2 468 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 NELFBQ8WX92 580 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 SYAP1Q96A49 352 aaPredicted RBP24.97■■□□□ 1.59
NEK9-203ENST00000553945 MMS19Q96T76 1030 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 WDR6Q9NNW5 1121 aaKnown RBP24.97■■□□□ 1.59
NEK9-203ENST00000553945 DDX43Q9NXZ2 648 aaKnown RBP24.97■■□□□ 1.59
NEK9-203ENST00000553945 MAFFQ9ULX9 164 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 CTNND2Q9UQB3 1225 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 INSL5Q9Y5Q6 135 aa24.97■■□□□ 1.59
NEK9-203ENST00000553945 CLUHO75153 1309 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 ATICP31939 592 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 TNNC1P63316 161 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 MYL7Q01449 175 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 ZACNQ401N2 412 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 SV2AQ7L0J3 742 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 DPH6Q7L8W6 267 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 ZC3H3Q8IXZ2 948 aaKnown RBP24.96■■□□□ 1.59
NEK9-203ENST00000553945 NUP62CLQ9H1M0 184 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 MMRN2Q9H8L6 949 aa24.96■■□□□ 1.59
NEK9-203ENST00000553945 MTMR11A4FU01 709 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 VNN1O95497 513 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 VNN2O95498 520 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 LHX1P48742 406 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 CDR1P51861 262 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 TSPY1Q01534 308 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 ENPEPQ07075 957 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 DUSP4Q13115 394 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 WDR72Q3MJ13 1102 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 OSTM1Q86WC4 334 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 ATAD1Q8NBU5 361 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 SPATA18Q8TC71 538 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 XYLT2Q9H1B5 865 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 NXF1Q9UBU9 619 aaKnown RBP24.95■■□□□ 1.58
NEK9-203ENST00000553945 SLC27A5Q9Y2P5 690 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 TTC28Q96AY4 2481 aa24.95■■□□□ 1.58
NEK9-203ENST00000553945 C2CD4DB7Z1M9 353 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 SLC16A3O15427 465 aaKnown RBP24.94■■□□□ 1.58
NEK9-203ENST00000553945 STAU1O95793 577 aaKnown RBP24.94■■□□□ 1.58
NEK9-203ENST00000553945 POU2F2P09086 479 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 ACAT1P24752 427 aaKnown RBP24.94■■□□□ 1.58
NEK9-203ENST00000553945 GCLMP48507 274 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 NTHL1P78549 312 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 PPP3CAQ08209 521 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 ZNF699Q32M78 642 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 LIMS2Q7Z4I7 341 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 DCP1BQ8IZD4 617 aaKnown RBP24.94■■□□□ 1.58
NEK9-203ENST00000553945 TDRD5Q8NAT2 981 aaKnown RBP24.94■■□□□ 1.58
NEK9-203ENST00000553945 ACBD6Q9BR61 282 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 CRISPLD1Q9H336 500 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 HCFC1R1Q9NWW0 138 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 USTQ9Y2C2 406 aa24.94■■□□□ 1.58
NEK9-203ENST00000553945 BICDL2A1A5D9 508 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 GABRDO14764 452 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 PIK3CAP42336 1068 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 STX17P56962 302 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 TWF1Q12792 350 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 PAK1Q13153 545 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 TTI2Q6NXR4 508 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 LRRTM3Q86VH5 581 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 RNF135Q8IUD6 432 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 GPT2Q8TD30 523 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 KBTBD7Q8WVZ9 684 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 ELMO3Q96BJ8 720 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 ACSF2Q96CM8 615 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms