RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 CDK5RAP1Q96SZ6 601 aaKnown RBP4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 ZSWIM1Q9BR11 485 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 BRIP1Q9BX63 1249 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 STK31Q9BXU1 1019 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 DPH1Q9BZG8 443 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 TTYH3Q9C0H2 523 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 MS4A7Q9GZW8 240 aaPredicted RBP4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 KLC2Q9H0B6 622 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 PLCB1Q9NQ66 1216 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 A1CFQ9NQ94 594 aaKnown RBP4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 SMPD4Q9NXE4 827 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 HDAC9Q9UKV0 1011 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 CNOT11Q9UKZ1 510 aaKnown RBP4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 AGAP1Q9UPQ3 857 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 JAG2Q9Y219 1238 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 AATKQ6ZMQ8 1374 aa4.4□□□□□ -1.71
EFCAB11-204ENST00000553871 CCDC195A0A1B0GUA6 201 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 MBD3L4A6NDZ8 208 aaPredicted RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 MBD3L3A6NE82 208 aaPredicted RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 E9PLN8 166 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 APOL1O14791 398 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 ZNF185O15231 689 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 THAP12O43422 761 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 SETSIPP0DME0 302 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 TSHRP16473 764 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 MAPK10P53779 464 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 STK3Q13188 491 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 PDCD4Q53EL6 469 aaKnown RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 FAM209BQ5JX69 171 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 C10orf62Q5T681 223 aaPredicted RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 SLC30A10Q6XR72 485 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 TOGARAM2Q6ZUX3 1019 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 MAPKAPK5Q8IW41 473 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 TTC9BQ8N6N2 239 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 ENAHQ8N8S7 591 aaPredicted RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 NSUN7Q8NE18 718 aaKnown RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 CXorf38Q8TB03 319 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 DEPTORQ8TB45 409 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 MAML1Q92585 1016 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 RNF31Q96EP0 1072 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 ZC3H10Q96K80 434 aaKnown RBP4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 SGCZQ96LD1 299 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 MED15Q96RN5 788 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 NEU1Q99519 415 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 VKORC1Q9BQB6 163 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 SELENOOQ9BVL4 669 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 SPATA5L1Q9BVQ7 753 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 VPS11Q9H270 941 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 CD248Q9HCU0 757 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 PARPBPQ9NWS1 579 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 COL20A1Q9P218 1284 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 XPR1Q9UBH6 696 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 HESX1Q9UBX0 185 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 LRCH1Q9Y2L9 728 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 NEU2Q9Y3R4 380 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 NOX1Q9Y5S8 564 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 FPGT-TNNI3KV9GXZ4 949 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 XDHP47989 1333 aa4.39□□□□□ -1.71
EFCAB11-204ENST00000553871 A0A087WWL8 130 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 TMEM233B4DJY2 109 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 F8W8V4 182 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 PYCARD-AS1I3L0S3 204 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 RNASET2O00584 256 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 FAM20BO75063 409 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 ANXA2P07355 339 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 ATXN1LP0C7T5 689 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 CYP2C9P11712 490 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 ITGALP20701 1170 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 SERPINB3P29508 390 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 VIPR2P41587 438 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 CARSP49589 748 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 KRT17Q04695 432 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 IQCB1Q15051 598 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 RABL3Q5HYI8 236 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 KLHDC7AQ5VTJ3 777 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 DCAF12L1Q5VU92 463 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 IZUMO3Q5VZ72 239 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 RNF44Q7L0R7 432 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 BEND5Q7L4P6 421 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 PPP1R32Q7Z5V6 425 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 CLNKQ7Z7G1 428 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 MYLK4Q86YV6 388 aaPredicted RBP4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 KRTAP19-1Q8IUB9 90 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 YAF2Q8IY57 180 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 SDR16C5Q8N3Y7 309 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 PSD4Q8NDX1 1056 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 SMCR8Q8TEV9 937 aaPredicted RBP4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 RAPGEF4Q8WZA2 1011 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 SPSB4Q96A44 273 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 SLC39A13Q96H72 371 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 SNX22Q96L94 193 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 WWC2-AS2Q96NR7 200 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 SLC46A1Q96NT5 459 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 PPP1R9BQ96SB3 815 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 ARPC5LQ9BPX5 153 aa4.38□□□□□ -1.71
EFCAB11-204ENST00000553871 MYH16Q9H6N6 1097 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms