RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 NDST1P52848 882 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 TUSC3Q13454 348 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 SOWAHAQ2M3V2 549 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 ACAD10Q6JQN1 1059 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 LIMS2Q7Z4I7 341 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 SLC35F6Q8N357 371 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 RNF10Q8N5U6 811 aaKnown RBP18.74■□□□□ 0.59
PSEN1-206ENST00000553447 TOP6BLQ8N6T0 577 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 KIF18AQ8NI77 898 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 URGCPQ8TCY9 931 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 TFAP2BQ92481 460 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 DDX27Q96GQ7 796 aaKnown RBP18.74■□□□□ 0.59
PSEN1-206ENST00000553447 UROC1Q96N76 676 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 ZSWIM1Q9BR11 485 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 SALL4Q9UJQ4 1053 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 NCANO14594 1321 aa18.74■□□□□ 0.59
PSEN1-206ENST00000553447 FNDC1Q4ZHG4 1894 aaPredicted RBP18.73■□□□□ 0.59
PSEN1-206ENST00000553447 KIAA0100Q14667 2235 aaKnown RBP18.73■□□□□ 0.59
PSEN1-206ENST00000553447 ALPK3Q96L96 1907 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 FANCGO15287 622 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 TACC1O75410 805 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 CFHP08603 1231 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 FGFR1P11362 822 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 CD19P15391 556 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 ORC1Q13415 861 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 UPP1Q16831 310 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 NOMO2Q5JPE7 1267 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 DPH6Q7L8W6 267 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 DEFB128Q7Z7B8 93 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 CTNNBL1Q8WYA6 563 aaPredicted RBP18.73■□□□□ 0.59
PSEN1-206ENST00000553447 NT5C1AQ9BXI3 368 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 PCDHGC3Q9UN70 934 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 PCDHB7Q9Y5E2 793 aa18.73■□□□□ 0.59
PSEN1-206ENST00000553447 A0A0A6YYK5 440 aaPredicted RBP18.72■□□□□ 0.59
PSEN1-206ENST00000553447 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.72■□□□□ 0.59
PSEN1-206ENST00000553447 KIAA0355O15063 1070 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 MED7O43513 233 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 HUS1O60921 280 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 MOCS3O95396 460 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 VDRP11473 427 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 ABCB4P21439 1286 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 CASQ1P31415 396 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 SSTR3P32745 418 aaPredicted RBP18.72■□□□□ 0.59
PSEN1-206ENST00000553447 NOMO3P69849 1222 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 CENPCQ03188 943 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 CNKSR3Q6P9H4 555 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 UNC93AQ86WB7 457 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 PASD1Q8IV76 773 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 APPL2Q8NEU8 664 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 KBTBD7Q8WVZ9 684 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 CYFIP2Q96F07 1278 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 NOX5Q96PH1 765 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 PAAF1Q9BRP4 392 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 THAP2Q9H0W7 228 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 KANSL3Q9P2N6 904 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 KIAA1257Q9ULG3 409 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 L1RE1Q9UN81 338 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 NME7Q9Y5B8 376 aa18.72■□□□□ 0.59
PSEN1-206ENST00000553447 FAM170AA1A519 330 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 CYB561D2O14569 222 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 LSM8O95777 96 aaKnown RBP18.71■□□□□ 0.59
PSEN1-206ENST00000553447 TIMP1P01033 207 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 FAM163BP0C2L3 166 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 WARSP23381 471 aaKnown RBP18.71■□□□□ 0.59
PSEN1-206ENST00000553447 IGFBP6P24592 240 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-206ENST00000553447 NAA35Q5VZE5 725 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 PPP1R2P3Q6NXS1 205 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 ADGRF2Q8IZF7 708 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 C3orf58Q8NDZ4 430 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 OR6B3Q8NGW1 331 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 ARHGEF26Q96DR7 871 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 SENP8Q96LD8 212 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 HEXIM2Q96MH2 286 aaKnown RBP18.71■□□□□ 0.59
PSEN1-206ENST00000553447 SNX25Q9H3E2 840 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 PRDM5Q9NQX1 630 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-206ENST00000553447 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
PSEN1-206ENST00000553447 LRFN2Q9ULH4 789 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 CAPN6Q9Y6Q1 641 aa18.71■□□□□ 0.59
PSEN1-206ENST00000553447 TRIM43BA6NCK2 446 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 BUB1O43683 1085 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 PAX3P23760 479 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 CDH5P33151 784 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-206ENST00000553447 NSFP46459 744 aaKnown RBP18.7■□□□□ 0.58
PSEN1-206ENST00000553447 AARSP49588 968 aaKnown RBP eCLIP18.7■□□□□ 0.58
PSEN1-206ENST00000553447 NAP1L1P55209 391 aaKnown RBP18.7■□□□□ 0.58
PSEN1-206ENST00000553447 GPC5P78333 572 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 DSC1Q08554 894 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 SGO2Q562F6 1265 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 DSTYKQ6XUX3 929 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 UBE2Q1Q7Z7E8 422 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 CRIPAKQ8N1N5 446 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 PDCL2Q8N4E4 241 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 CPA5Q8WXQ8 436 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 RFFLQ8WZ73 363 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 RABGGTAQ92696 567 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 TRIM43Q96BQ3 446 aaPredicted RBP18.7■□□□□ 0.58
PSEN1-206ENST00000553447 VWCEQ96DN2 955 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 ALS2CR12Q96Q35 445 aa18.7■□□□□ 0.58
PSEN1-206ENST00000553447 TBC1D13Q9NVG8 400 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms