RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 CCDC127Q96BQ5 260 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 DHTKD1Q96HY7 919 aaPredicted RBP9.88□□□□□ -0.83
CDK4-211ENST00000552254 ANKRD36BP1Q96IX9 119 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 CGRRF1Q99675 332 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 EMILIN2Q9BXX0 1053 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 MTMR12Q9C0I1 747 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 NUP62CLQ9H1M0 184 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDK4-211ENST00000552254 FNIP2Q9P278 1114 aa9.88□□□□□ -0.83
CDK4-211ENST00000552254 TRIM49BA6NDI0 452 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 PSMA7O14818 248 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 SYN3O14994 580 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 SPTLC1O15269 473 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 TNNC2P02585 160 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 ASGR2P07307 311 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 TMEM191BP0C7N4 346 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 DLATP10515 647 aaKnown RBP9.87□□□□□ -0.83
CDK4-211ENST00000552254 TNNI1P19237 187 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 PAX3P23760 479 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 CCNE1P24864 410 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 POLR2BP30876 1174 aaKnown RBP9.87□□□□□ -0.83
CDK4-211ENST00000552254 PPP1R2P41236 205 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 CLCN5P51795 746 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 PMS1P54277 932 aaKnown RBP9.87□□□□□ -0.83
CDK4-211ENST00000552254 CLDN10P78369 228 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 ITIH3Q06033 890 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 STIM1Q13586 685 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 MRPL58Q14197 206 aaKnown RBP9.87□□□□□ -0.83
CDK4-211ENST00000552254 PSMD5Q16401 504 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 DUOXA2Q1HG44 320 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 CEP135Q66GS9 1140 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 PDXDC1Q6P996 788 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 PPFIBP1Q86W92 1011 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 PALB2Q86YC2 1186 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 CSGALNACT2Q8N6G5 542 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 BORCS6Q96GS4 357 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 SENP8Q96LD8 212 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 FNBP1Q96RU3 617 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 TSG101Q99816 390 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 CLSTN3Q9BQT9 956 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 MAN1C1Q9NR34 630 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 SIX4Q9UIU6 781 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 ITGA11Q9UKX5 1188 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 PCDHB8Q9UN66 801 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 AGAP1Q9UPQ3 857 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 FRMD4BQ9Y2L6 1034 aa9.87□□□□□ -0.83
CDK4-211ENST00000552254 LRRIQ3A6PVS8 624 aaPredicted RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 CETN3O15182 167 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 ADAM12O43184 909 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 TBC1D4O60343 1298 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 RFPL2O75678 378 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 AKAP3O75969 853 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 ADH1AP07327 375 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 HOXB3P14651 431 aaPredicted RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 PSMC2P35998 433 aaKnown RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 MTHFRP42898 656 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 TAF6P49848 677 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 MCCD1P59942 119 aaPredicted RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 DLG4P78352 724 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 RBP5P82980 135 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 CREMQ03060 361 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 LRRC63Q05C16 580 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 ATAT1Q5SQI0 421 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 VARS2Q5ST30 1063 aaKnown RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 C1orf220Q5T0J3 134 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 KLHL10Q6JEL2 608 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 DSTYKQ6XUX3 929 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 ANKS3Q6ZW76 656 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 TRAPPC11Q7Z392 1133 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 GPR149Q86SP6 731 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 ZC3H3Q8IXZ2 948 aaKnown RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 CCDC105Q8IYK2 499 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 FAM186BQ8IYM0 893 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 LRRC52Q8N7C0 313 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 TDRD5Q8NAT2 981 aaKnown RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 NELFBQ8WX92 580 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 EEF2KMTQ96G04 330 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 DOCK6Q96HP0 2047 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 NECTIN4Q96NY8 510 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 SEMA4AQ9H3S1 761 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 SFXN1Q9H9B4 322 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 DZANK1Q9NVP4 752 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 MTRRQ9UBK8 725 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 LIMD1Q9UGP4 676 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 FBXL21Q9UKT6 434 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 TIMM13Q9Y5L4 95 aaPredicted RBP9.86□□□□□ -0.83
CDK4-211ENST00000552254 BACE2Q9Y5Z0 518 aa9.86□□□□□ -0.83
CDK4-211ENST00000552254 CCDC195A0A1B0GUA6 201 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 KPNA7A9QM74 516 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 H7C4K7 107 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 CYB561D2O14569 222 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 OAZ2O95190 189 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 MBD3O95983 291 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 C1RP00736 705 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 CST3P01034 146 aaPredicted RBP9.85□□□□□ -0.83
CDK4-211ENST00000552254 C4BPAP04003 597 aaKnown RBP9.85□□□□□ -0.83
CDK4-211ENST00000552254 CYP11A1P05108 521 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 KRT19P08727 400 aa9.85□□□□□ -0.83
CDK4-211ENST00000552254 TYMPP19971 482 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms