RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 TRANK1O15050 2925 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 NKRFO15226 690 aaKnown RBP eCLIP7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 NBNO60934 754 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 CYP21A2P08686 494 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 PCP11498 1178 aaKnown RBP7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 SARSP49591 514 aaKnown RBP7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 KIAA0753Q2KHM9 967 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 SPATS1Q496A3 300 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 TTC22Q5TAA0 569 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 GTF2IRD2BQ6EKJ0 949 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 GTF2IRD2Q86UP8 949 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 TRIM59Q8IWR1 403 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 C7orf31Q8N865 590 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 ZNF513Q8N8E2 541 aaPredicted RBP7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 GDPD5Q8WTR4 605 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 ZBTB8AQ96BR9 441 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 AMNQ9BXJ7 453 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 KRT23Q9C075 422 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 MRPL11Q9Y3B7 192 aaKnown RBP7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 PCDHA1Q9Y5I3 950 aa7.94□□□□□ -1.14
GNPTAB-209ENST00000552009 SCN10AQ9Y5Y9 1956 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 COL4A4P53420 1690 aaPredicted RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 LOC102724159A0A0B4J2E5 919 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 IFIT3O14879 490 aaKnown RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 ZBTB5O15062 677 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 CYTH3O43739 400 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 LPXNO60711 386 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 GGPS1O95749 300 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 CKBP12277 381 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 ACTN1P12814 892 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 RXRAP19793 462 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 UBA1P22314 1058 aaKnown RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 HSD17B4P51659 736 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 ANTXR2P58335 489 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 WDR5P61964 334 aaKnown RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 SP4Q02446 784 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 BFSP2Q13515 415 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 GRM4Q14833 912 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 PGM5Q15124 567 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 PWP2Q15269 919 aaKnown RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 DGKDQ16760 1214 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 HSDL1Q3SXM5 330 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 ZNF618Q5T7W0 954 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.93□□□□□ -1.144e-6■□□□□ 8.7
GNPTAB-209ENST00000552009 ETV3LQ6ZN32 361 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 LRRC8DQ7L1W4 858 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 ZC3H18Q86VM9 953 aaKnown RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 MCF2L2Q86YR7 1114 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 DHX37Q8IY37 1157 aaKnown RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 SPATA33Q96N06 139 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 UHRF1Q96T88 793 aaPredicted RBP7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 PDCD2LQ9BRP1 358 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 MTCH2Q9Y6C9 303 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 PTPRSQ13332 1948 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 TTC28Q96AY4 2481 aa7.93□□□□□ -1.14
GNPTAB-209ENST00000552009 hCG_1642624A0A1W2PR95 340 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 B4DLN1 442 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 C22orf46C9J442 243 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 E7EWF7 191 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 HIP1O00291 1037 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 KPNA6O60684 536 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 EIF3JO75822 258 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 F2P00734 622 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 SSBP05455 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 THBDP07204 575 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 PFKMP08237 780 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 ADRB1P08588 477 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 CASTP20810 708 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 CHMLP26374 656 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 RFC2P35250 354 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 THPOP40225 353 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 KCNJ6P48051 423 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 MRPL12P52815 198 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 RPL11P62913 178 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 MRPS5P82675 430 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 RTP5Q14D33 572 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 TRIM71Q2Q1W2 868 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 PLEKHO2Q8TD55 490 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 ATXN2LQ8WWM7 1075 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 SEC14L1Q92503 715 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 MTMR8Q96EF0 704 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 IWS1Q96ST2 819 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 SEZ6LQ9BYH1 1024 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 ACTR10Q9NZ32 417 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 CTNNA3Q9UI47 895 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 CNOT11Q9UKZ1 510 aaKnown RBP7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 PNMA2Q9UL42 364 aa7.92□□□□□ -1.14
GNPTAB-209ENST00000552009 HAS3O00219 553 aa7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 PRICKLE3O43900 615 aaPredicted RBP7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 CSPG5O95196 566 aa7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 PLEKHA8P1O95397 391 aa7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 ATF4P18848 351 aaPredicted RBP7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 MRPS9P82933 396 aaKnown RBP7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 GNL2Q13823 731 aaKnown RBP7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 SV2CQ496J9 727 aa7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 CCDC178Q5BJE1 867 aa7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 CELF3Q5SZQ8 465 aaKnown RBP7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 UTP14CQ5TAP6 766 aaKnown RBP7.91□□□□□ -1.14
GNPTAB-209ENST00000552009 E4F1Q66K89 784 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms