RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PCDHGA9Q9Y5G4 932 aaKnown RBP2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PCDHGA8Q9Y5G5 932 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PCDHGA7Q9Y5G6 932 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PCDHGA6Q9Y5G7 932 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PCDHGA3Q9Y5H0 932 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PCDHGA2Q9Y5H1 932 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 NR2E3Q9Y5X4 410 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 GPR45Q9Y5Y3 372 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 MROH7-TTC4A0A0A0MT08 1334 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ASTN1O14525 1302 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 GRIN2DO15399 1336 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PTPRCP08575 1304 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 PTPRFP10586 1907 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 RLFQ13129 1914 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 ROBO3Q96MS0 1386 aa2.85□□□□□ -1.95
CPSF6-207ENST00000551516 VPS13AQ96RL7 3174 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 MYO15AQ9UKN7 3530 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 MYH3P11055 1940 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 A0A1B0GUL7 405 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CCDC194A0A1B0GVG4 234 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 TNPO2O14787 897 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 LPXNO60711 386 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CYP7B1O75881 506 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SNAI1O95863 264 aaPredicted RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 TFRCP02786 760 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CHGBP05060 677 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 KRT18P05783 430 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 ASGR2P07307 311 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 IFIT1P09914 478 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 OSMP13725 252 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 TAL1P17542 331 aaPredicted RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 AGXTP21549 392 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 APEX1P27695 318 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 IL15P40933 162 aaPredicted RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 GCLCP48506 637 aaPredicted RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 NOVP48745 357 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 MTNR1BP49286 362 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 GPR15P49685 360 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 PLCD1P51178 756 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 RBM5P52756 815 aaKnown RBP eCLIP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SLC16A1P53985 500 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 RARSP54136 660 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 LGALS4P56470 323 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 UBXN2AP68543 259 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CDK17Q00537 523 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SRSF2Q01130 221 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 TFCP2Q12800 502 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 MAP3K12Q12852 859 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 NFATC3Q12968 1075 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SPIDRQ14159 915 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 MYBPC3Q14896 1274 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 NOLC1Q14978 699 aaKnown RBP eCLIP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 ARHGEF6Q15052 776 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 ATP2B3Q16720 1220 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SKIDA1Q1XH10 827 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CR1LQ2VPA4 569 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 ANO4Q32M45 955 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 ALDH1L2Q3SY69 923 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CAVIN4Q5BKX8 364 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 PITRM1Q5JRX3 1037 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 ZBTB41Q5SVQ8 909 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SLC4A10Q6U841 1118 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 MAMDC4Q6UXC1 1216 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 TMC5Q6UXY8 1006 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SLC39A5Q6ZMH5 540 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CBLL1Q75N03 491 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 KANSL1Q7Z3B3 1105 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 FAM26EQ8N5C1 309 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CDYL2Q8N8U2 506 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 OR14C36Q8NHC7 312 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SSH3Q8TE77 659 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 SH3RF3Q8TEJ3 882 aaPredicted RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 FAM168AQ92567 244 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 ARHGAP45Q92619 1136 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 LPAR1Q92633 364 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 HIST1H2AHQ96KK5 128 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 HIST1H2AJQ99878 128 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 BTBD2Q9BX70 525 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 AMNQ9BXJ7 453 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 KIAA1683Q9H0B3 1180 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CD320Q9NPF0 282 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 PIH1D3Q9NQM4 214 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 CNNM1Q9NRU3 951 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 FTSJ1Q9UET6 329 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 DPP7Q9UHL4 492 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 PRSS50Q9UI38 385 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 HERC5Q9UII4 1024 aaKnown RBP2.84□□□□□ -1.95
CPSF6-207ENST00000551516 DENND2AQ9ULE3 1009 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 USP18Q9UMW8 372 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 RABGAP1Q9Y3P9 1069 aa2.84□□□□□ -1.95
CPSF6-207ENST00000551516 MAST3O60307 1309 aa2.84□□□□□ -1.96
CPSF6-207ENST00000551516 FLT1P17948 1338 aa2.84□□□□□ -1.96
CPSF6-207ENST00000551516 LOC285556D6RIA3 1793 aa2.84□□□□□ -1.96
CPSF6-207ENST00000551516 ZFHX4Q86UP3 3567 aa2.84□□□□□ -1.96
CPSF6-207ENST00000551516 C5orf42Q9H799 3197 aa2.84□□□□□ -1.96
CPSF6-207ENST00000551516 IGKV6D-41A0A0C4DH26 115 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 MYADML2A6NDP7 307 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 SLC15A5A6NIM6 579 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 C19orf81C9J6K1 198 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 DNM1LO00429 736 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms