RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 SEMA4CQ9C0C4 833 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 SLKQ9H2G2 1235 aaPredicted RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 CRISPLD1Q9H336 500 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 PRDM16Q9HAZ2 1276 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 XPNPEP1Q9NQW7 623 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 AFF4Q9UHB7 1163 aaKnown RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 SLC27A5Q9Y2P5 690 aa7.47□□□□□ -1.21
LIN7A-202ENST00000549417 COL5A1P20908 1838 aaPredicted RBP7.47□□□□□ -1.21
LIN7A-202ENST00000549417 PTPRQQ9UMZ3 2332 aa7.46□□□□□ -1.21
LIN7A-202ENST00000549417 H7C4K7 107 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 hCG_1984214I3L0E3 225 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 SLC28A2O43868 658 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 WISP1O95388 367 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 TDP2O95551 362 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 ATXN1LP0C7T5 689 aaKnown RBP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 LIG1P18858 919 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 YWHABP31946 246 aaKnown RBP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 LIFRP42702 1097 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 QARSP47897 775 aaKnown RBP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 SEMG2Q02383 582 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 DUSP4Q13115 394 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 CAMK2BQ13554 666 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 MXD4Q14582 209 aaPredicted RBP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 RTN1Q16799 776 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 ARHGAP15Q53QZ3 475 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 TMEM92Q6UXU6 159 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 LRRC69Q6ZNQ3 347 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 TEX2Q8IWB9 1127 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 PGBD3Q8N328 593 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 TTC9BQ8N6N2 239 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 ZNF713Q8N859 430 aaPredicted RBP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 OLIG1Q8TAK6 271 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 CEP76Q8TAP6 659 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 RIN3Q8TB24 985 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 HMGB4Q8WW32 186 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 CD101Q93033 1021 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 TMEM87BQ96K49 555 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 PPP1R10Q96QC0 940 aaKnown RBP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 SLC46A2Q9BY10 475 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 TRIM4Q9C037 500 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 PDZD7Q9H5P4 517 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 C6orf50Q9HD87 102 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 ZDHHC4Q9NPG8 344 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 DNAAF2Q9NVR5 837 aaKnown RBP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 OBP2AQ9NY56 170 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 BCCIPQ9P287 314 aaKnown RBP eCLIP7.46□□□□□ -1.22
LIN7A-202ENST00000549417 TPCN1Q9ULQ1 816 aa7.46□□□□□ -1.22
LIN7A-202ENST00000549417 LRRIQ4A6NIV6 560 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 PLK4O00444 970 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 PODXLO00592 558 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 TLX3O43711 291 aaPredicted RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 CBFA2T3O75081 653 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 GJB3O75712 270 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 GLRA2P23416 452 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 ALDH1A3P47895 512 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 CXADRP78310 365 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 AMPD2Q01433 879 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 RPL6Q02878 288 aaKnown RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 CYP4A11Q02928 519 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 MRPL58Q14197 206 aaKnown RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 LY6DQ14210 128 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 CTTNQ14247 550 aaKnown RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 CRY1Q16526 586 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 PFKFB3Q16875 520 aaPredicted RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 PLEKHG6Q3KR16 790 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 COLEC12Q5KU26 742 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 PEAR1Q5VY43 1037 aaPredicted RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 ZNF280DQ6N043 979 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 SYNE3Q6ZMZ3 975 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 MAEAQ7L5Y9 396 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 GPR155Q7Z3F1 870 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 DNAJB7Q7Z6W7 309 aaPredicted RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 FMNL3Q8IVF7 1028 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 SFTPA1Q8IWL2 248 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 EXOC8Q8IYI6 725 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 TMEM130Q8N3G9 435 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 USP33Q8TEY7 942 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 LPIN3Q9BQK8 851 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 LXNQ9BS40 222 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 ZMYND12Q9H0C1 365 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 TASP1Q9H6P5 420 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 RBM28Q9NW13 759 aaKnown RBP7.45□□□□□ -1.22
LIN7A-202ENST00000549417 TOR4AQ9NXH8 423 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 RGL1Q9NZL6 768 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 PCOLCE2Q9UKZ9 415 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 BRPF3Q9ULD4 1205 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 TBX20Q9UMR3 447 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 NUB1Q9Y5A7 615 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 COL6A6A6NMZ7 2263 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 BOD1L1Q8NFC6 3051 aa7.45□□□□□ -1.22
LIN7A-202ENST00000549417 DOPEY2Q9Y3R5 2298 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 TEX51A0A1B0GUA7 166 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 GOLGA8AA7E2F4 631 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 GOLGA8BA8MQT2 603 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 B8ZZF3 427 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 K7EQS6 105 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 N4BP3O15049 544 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 ALDH1A2O94788 518 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 EDN1P05305 212 aa7.44□□□□□ -1.22
LIN7A-202ENST00000549417 SYPP08247 313 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms