RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 FERP16591 822 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 GNL1P36915 607 aaPredicted RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 STAT1P42224 750 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 ASPAP45381 313 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 GSDMDP57764 484 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 POLR2FP61218 127 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 ZBED6P86452 979 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 DSG1Q02413 1049 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 KCNMA1Q12791 1236 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 RAPGEF1Q13905 1077 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 SMC1AQ14683 1233 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 NFE2Q16621 373 aaPredicted RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 PPP1R2P3Q6NXS1 205 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 RTL10Q7L3V2 364 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 RNF168Q8IYW5 571 aaPredicted RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 DCP1BQ8IZD4 617 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 PDCL2Q8N4E4 241 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 KLHL23Q8NBE8 558 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 OR6B3Q8NGW1 331 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 C2orf15Q8WU43 125 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 SHC3Q92529 594 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 SYN2Q92777 582 aaPredicted RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 ACBD6Q9BR61 282 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 PAAF1Q9BRP4 392 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 PI4K2AQ9BTU6 479 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 GANQ9H2C0 597 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 NKX2-4Q9H2Z4 354 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 TLR9Q9NR96 1032 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 CISHQ9NSE2 258 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 LMCD1Q9NZU5 365 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 FNIP2Q9P278 1114 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 CAPN11Q9UMQ6 739 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 BACE2Q9Y5Z0 518 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 IRAK3Q9Y616 596 aa10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 BZW2Q9Y6E2 419 aaKnown RBP10.43□□□□□ -0.74
SMARCD1-206ENST00000549274 TSC2P49815 1807 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 LCHNA4D1U4 455 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 GRXCR1A8MXD5 290 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 A8MXQ7 604 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 NT5C1B-RDH14C9J2C7 533 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 GABRDO14764 452 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 PPEF2O14830 753 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 SPTLC1O15269 473 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 MED7O43513 233 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 PDE6CP51160 858 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 SLC8A3P57103 927 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 PTK2Q05397 1052 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 LRMPQ12912 555 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 GPM6BQ13491 265 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 MEA1Q16626 185 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 SOWAHAQ2M3V2 549 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 SPOPLQ6IQ16 392 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 PHLDB3Q6NSJ2 640 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 SCARA5Q6ZMJ2 495 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 C4orf50Q6ZRC1 276 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 TMC7Q7Z402 723 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 VPS36Q86VN1 386 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 CEP57Q86XR8 500 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 ZNF677Q86XU0 584 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 VPS52Q8N1B4 723 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 C3orf58Q8NDZ4 430 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 HASPINQ8TF76 798 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 NAA15Q9BXJ9 866 aaKnown RBP10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 ZBP1Q9H171 429 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 APOBEC3GQ9HC16 384 aaKnown RBP10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 SIX2Q9NPC8 291 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 ENTPD7Q9NQZ7 604 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 CHST7Q9NS84 486 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 HSFX1Q9UBD0 423 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 L1RE1Q9UN81 338 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 CNTN6Q9UQ52 1028 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 YBX2Q9Y2T7 364 aaKnown RBP10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 CEP83Q9Y592 693 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 PCDHB4Q9Y5E5 795 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 VWA8A3KMH1 1905 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 PLXNA4Q9HCM2 1894 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 MYO9BQ13459 2157 aa10.42□□□□□ -0.74
SMARCD1-206ENST00000549274 AKR1B15C9JRZ8 316 aaPredicted RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 F8VZ95 297 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 B4GALT3O60512 393 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 CILPO75339 1184 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 ZMYND10O75800 440 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 EFEMP2O95967 443 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 ITGB1P05556 798 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 ADH1AP07327 375 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 LINC00271P0C7V0 271 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 KRT5P13647 590 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 ANXA13P27216 316 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 TKTP29401 623 aaKnown RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 SOX5P35711 763 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 BRCC3P46736 316 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 NDUFV1P49821 464 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 NUBP1P53384 320 aa10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 MRPL58Q14197 206 aaKnown RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 DRAP1Q14919 205 aaPredicted RBP10.41□□□□□ -0.74
SMARCD1-206ENST00000549274 PSMD5Q16401 504 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms