RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 IL18RAPO95256 599 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 ATF6P18850 670 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 GDI1P31150 447 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 STAT6P42226 847 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 ALDH1A3P47895 512 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 SLC39A14Q15043 492 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 ZNF528Q3MIS6 628 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 SLC39A12Q504Y0 691 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 ARMCX5Q6P1M9 558 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 CCDC73Q6ZRK6 1079 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 GAREM2Q75VX8 874 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 BRSK2Q8IWQ3 736 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 ZSWIM2Q8NEG5 633 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 IRF7Q92985 503 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 BORCS6Q96GS4 357 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 NELL2Q99435 816 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 PYM1Q9BRP8 204 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 GPR88Q9GZN0 384 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 DSEQ9UL01 958 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 EXOC7Q9UPT5 735 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 MRPS17Q9Y2R5 130 aaKnown RBP18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 ASB3Q9Y575 518 aa18.8■□□□□ 0.6
CHMP1A-205ENST00000548650 HEPACAM2A8MVW5 462 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 CYB561D2O14569 222 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 LAMTOR5O43504 91 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 GCNT3O95395 438 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 NASPP49321 788 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 POSTNQ15063 836 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 DNAJB7Q7Z6W7 309 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 NT5DC4Q86YG4 428 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 MFSD6LQ8IWD5 586 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 KCNG4Q8TDN1 519 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 SAAL1Q96ER3 474 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 ACCSQ96QU6 501 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 SEPT5Q99719 369 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 LPIN3Q9BQK8 851 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 FAM213AQ9BRX8 229 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 PRMT8Q9NR22 394 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 FOXD4L1Q9NU39 408 aa18.79■□□□□ 0.6
CHMP1A-205ENST00000548650 DCHS1Q96JQ0 3298 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 CACNA1AO00555 2505 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 K7ELQ4 463 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 IDEP14735 1019 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 CDR1P51861 262 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 FCHO2Q0JRZ9 810 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 ALCAMQ13740 583 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 SV2CQ496J9 727 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 WSCD1Q658N2 575 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 ZNF560Q96MR9 790 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 BACH2Q9BYV9 841 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 ZSCAN16Q9H4T2 348 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 NDRG2Q9UN36 371 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 PIAS3Q9Y6X2 628 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 CEP250Q9BV73 2442 aa18.78■□□□□ 0.6
CHMP1A-205ENST00000548650 KPNA7A9QM74 516 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 MAN2B1O00754 1011 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 ZNF263O14978 683 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 NCAM2O15394 837 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 STX6O43752 255 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 GARTP22102 1010 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 GABRR2P28476 465 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 ITIH5Q86UX2 942 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 LRRTM3Q86VH5 581 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 METTL23Q86XA0 190 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 C1orf127Q8N9H9 656 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 NELL1Q92832 810 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 E2F7Q96AV8 911 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 FAM84AQ96KN4 292 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 CBWD1Q9BRT8 395 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 CHRDQ9H2X0 955 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 IL21Q9HBE4 155 aa18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 RBAKQ9NYW8 714 aaPredicted RBP18.77■□□□□ 0.6
CHMP1A-205ENST00000548650 KINO60870 393 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 PRAMEF12O95522 483 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 FGF19O95750 216 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 POLR2BP30876 1174 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 TFAMQ00059 246 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 CSTF1Q05048 431 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 MTAPQ13126 283 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 MGAT5BQ3V5L5 792 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 THEM5Q8N1Q8 247 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 PDILTQ8N807 584 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 SUMF1Q8NBK3 374 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 LINC00301Q8NCQ3 95 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 CXorf38Q8TB03 319 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 C2orf15Q8WU43 125 aaKnown RBP18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 ATXN3LQ9H3M9 355 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 PANK4Q9NVE7 773 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 PCDHB13Q9Y5F0 798 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 PCDHGA2Q9Y5H1 932 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 DMXL1Q9Y485 3027 aa18.76■□□□□ 0.59
CHMP1A-205ENST00000548650 ZNF638Q14966 1978 aaKnown RBP18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 FRYLO94915 3013 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 CHADO15335 359 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 ITGB3P05106 788 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 PNPLA4P41247 253 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 TUFMP49411 452 aaKnown RBP18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 CYP4F8P98187 520 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 SMARCB1Q12824 385 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms