RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 CLUHO75153 1309 aa13.02□□□□□ -0.33
HDAC7-226ENST00000547259 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 MEFVO15553 781 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-226ENST00000547259 TPM2P07951 284 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 TRIM49P0CI25 452 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 TRIM49CP0CI26 452 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 SRFP11831 508 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
HDAC7-226ENST00000547259 MARSP56192 900 aaKnown RBP13.01□□□□□ -0.33
HDAC7-226ENST00000547259 WNT7BP56706 349 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 GRIK3Q13003 919 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 TMEM132DQ14C87 1099 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 ANGPT1Q15389 498 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 TCP11X2Q5H9J9 407 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 GLRA4Q5JXX5 417 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 CWF19L1Q69YN2 538 aaKnown RBP13.01□□□□□ -0.33
HDAC7-226ENST00000547259 JADE1Q6IE81 842 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 PDXDC1Q6P996 788 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 ZC3H14Q6PJT7 736 aaKnown RBP13.01□□□□□ -0.33
HDAC7-226ENST00000547259 TMC2Q8TDI7 906 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 SHDQ96IW2 340 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 ZFP42Q96MM3 310 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 HSD3B7Q9H2F3 369 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 MMRN2Q9H8L6 949 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 PLEKHA5Q9HAU0 1116 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 MARCH5Q9NX47 278 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 CNTN3Q9P232 1028 aa13.01□□□□□ -0.33
HDAC7-226ENST00000547259 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC7-226ENST00000547259 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.339e-7■■■■■ 32.1
HDAC7-226ENST00000547259 LRRIQ3A6PVS8 624 aaPredicted RBP13□□□□□ -0.33
HDAC7-226ENST00000547259 STX10O60499 249 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 B4GALT3O60512 393 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 TADA2AO75478 443 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 EFEMP2O95967 443 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 NFICP08651 508 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 TMEM191BP0C7N4 346 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 ATP1A3P13637 1013 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 ZNF18P17022 549 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 NPR3P17342 541 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 TNNI1P19237 187 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 SCNN1GP51170 649 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 AFF1P51825 1210 aaKnown RBP13□□□□□ -0.33
HDAC7-226ENST00000547259 DLG4P78352 724 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 ENPEPQ07075 957 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 ELAVL2Q12926 359 aaKnown RBP13□□□□□ -0.33
HDAC7-226ENST00000547259 MAN2A1Q16706 1144 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 LMBRD2Q68DH5 695 aaPredicted RBP13□□□□□ -0.33
HDAC7-226ENST00000547259 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 FUT10Q6P4F1 479 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 RTL10Q7L3V2 364 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 WDR49Q8IV35 697 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 SLC44A3Q8N4M1 653 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 PLEKHO2Q8TD55 490 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 PARD3BQ8TEW8 1205 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 TUBGCP2Q9BSJ2 902 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 PRKD2Q9BZL6 878 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 CXCL16Q9H2A7 254 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 TAB2Q9NYJ8 693 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 ADAM28Q9UKQ2 775 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 DERAQ9Y315 318 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 CACNA1AO00555 2505 aa13□□□□□ -0.33
HDAC7-226ENST00000547259 CACNA1IQ9P0X4 2223 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 PTPRJQ12913 1337 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
HDAC7-226ENST00000547259 XPOTO43592 962 aaKnown RBP12.99□□□□□ -0.33
HDAC7-226ENST00000547259 TNNC2P02585 160 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 HNRNPA1P09651 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDAC7-226ENST00000547259 LAMP2P13473 410 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 KCNE1P15382 129 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 TFAMQ00059 246 aaKnown RBP12.99□□□□□ -0.33
HDAC7-226ENST00000547259 KRT31Q15323 416 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 XKR4Q5GH76 650 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 ALKAL1Q6UXT8 129 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 PALB2Q86YC2 1186 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 NT5DC4Q86YG4 428 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 EFCAB13Q8IY85 973 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 CACTINQ8WUQ7 758 aaKnown RBP12.99□□□□□ -0.33
HDAC7-226ENST00000547259 SLC35C1Q96A29 364 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 LIMA1Q9UHB6 759 aaKnown RBP12.99□□□□□ -0.33
HDAC7-226ENST00000547259 UBQLN1Q9UMX0 589 aaKnown RBP12.99□□□□□ -0.33
HDAC7-226ENST00000547259 C2CD2Q9Y426 696 aa12.99□□□□□ -0.33
HDAC7-226ENST00000547259 PTGESO14684 152 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 TGM5O43548 720 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 PI15O43692 258 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 RFPL2O75678 378 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 SERPINC1P01008 464 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 AFPP02771 609 aaKnown RBP12.98□□□□□ -0.33
HDAC7-226ENST00000547259 THP07101 528 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 CFHP08603 1231 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 ID4P47928 161 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 GCLMP48507 274 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 MXI1P50539 228 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 COPB1P53618 953 aaKnown RBP12.98□□□□□ -0.33
HDAC7-226ENST00000547259 AP3M2P53677 418 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms