RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 VRTNQ9H8Y1 702 aa16.51■□□□□ 0.23
SSH1-204ENST00000546697 RAPGEFL1Q9UHV5 662 aa16.51■□□□□ 0.23
SSH1-204ENST00000546697 AGAP1Q9UPQ3 857 aa16.51■□□□□ 0.23
SSH1-204ENST00000546697 ASB3Q9Y575 518 aa16.51■□□□□ 0.23
SSH1-204ENST00000546697 MUC6Q6W4X9 2439 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 PRRG1O14668 218 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 KIF20AO95235 890 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 TMEM191BP0C7N4 346 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 CPB1P15086 417 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 GBP2P32456 591 aaPredicted RBP16.5■□□□□ 0.23
SSH1-204ENST00000546697 NUBP1P53384 320 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 NTHL1P78549 312 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 PLD1Q13393 1074 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 SLC5A9Q2M3M2 681 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 WSCD1Q658N2 575 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 SCARA3Q6AZY7 606 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 SLC44A3Q8N4M1 653 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 FBXL6Q8N531 539 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 ITFG1Q8TB96 612 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 TIGD1Q96MW7 591 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 GDPD2Q9HCC8 539 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 SLC2A4RGQ9NR83 387 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 HCFC1R1Q9NWW0 138 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 CEP72Q9P209 647 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 L1RE1Q9UN81 338 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 YIPF1Q9Y548 306 aa16.5■□□□□ 0.23
SSH1-204ENST00000546697 ZNF197O14709 1029 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 MOSPD3O75425 235 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 SRFP11831 508 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 AP3M2P53677 418 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 ZCWPW2Q504Y3 356 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 POTEHQ6S545 545 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 MTSS1LQ765P7 747 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 GET4Q7L5D6 327 aaPredicted RBP16.49■□□□□ 0.23
SSH1-204ENST00000546697 TRAPPC11Q7Z392 1133 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 METTL23Q86XA0 190 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 TMC8Q8IU68 726 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 THEM5Q8N1Q8 247 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 CSGALNACT2Q8N6G5 542 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 SPPL2BQ8TCT7 592 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 PARD3BQ8TEW8 1205 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 TMEM209Q96SK2 561 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 TRPV4Q9HBA0 871 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 ABCB6Q9NP58 842 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 WNT16Q9UBV4 365 aa16.49■□□□□ 0.23
SSH1-204ENST00000546697 KMT2EQ8IZD2 1858 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 CLIC2O15247 247 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 TNNC2P02585 160 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 OR4Q2P0C623 313 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 LHX1P48742 406 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
SSH1-204ENST00000546697 ARPP19P56211 112 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 FAM160A1Q05DH4 1040 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 TWF1Q12792 350 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 DUSP4Q13115 394 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 SOWAHAQ2M3V2 549 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 LRRTM3Q86VH5 581 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 PLEKHO2Q8TD55 490 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 ZNF516Q92618 1163 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 PSMG2Q969U7 264 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 XYLT2Q9H1B5 865 aa16.48■□□□□ 0.23
SSH1-204ENST00000546697 IKBKBO14920 756 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 HUS1O60921 280 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 TACC1O75410 805 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 ECI2O75521 394 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 WEE1P30291 646 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 ATICP31939 592 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 CCR2P41597 374 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 CYP2J2P51589 502 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 NFE2Q16621 373 aaPredicted RBP16.47■□□□□ 0.23
SSH1-204ENST00000546697 CFAP221Q4G0U5 840 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 FAM171BQ6P995 826 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 DCP1BQ8IZD4 617 aaKnown RBP16.47■□□□□ 0.23
SSH1-204ENST00000546697 ATAD1Q8NBU5 361 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 KBTBD7Q8WVZ9 684 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 FGF14Q92915 247 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 CCDC47Q96A33 483 aaKnown RBP16.47■□□□□ 0.23
SSH1-204ENST00000546697 PBXIP1Q96AQ6 731 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 CEP295NLQ96MC4 621 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
SSH1-204ENST00000546697 GSDMAQ96QA5 445 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 FNBP1Q96RU3 617 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 GTPBP4Q9BZE4 634 aaKnown RBP16.47■□□□□ 0.23
SSH1-204ENST00000546697 SMOC2Q9H3U7 446 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 MRPS23Q9Y3D9 190 aaKnown RBP16.47■□□□□ 0.23
SSH1-204ENST00000546697 HCN4Q9Y3Q4 1203 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 NUMBLQ9Y6R0 609 aa16.47■□□□□ 0.23
SSH1-204ENST00000546697 EXOC3O60645 756 aa16.46■□□□□ 0.23
SSH1-204ENST00000546697 CST3P01034 146 aaPredicted RBP16.46■□□□□ 0.23
SSH1-204ENST00000546697 NR3C1P04150 777 aa16.46■□□□□ 0.23
SSH1-204ENST00000546697 FCARP24071 287 aa16.46■□□□□ 0.23
SSH1-204ENST00000546697 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
SSH1-204ENST00000546697 INTS6LQ5JSJ4 861 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms