RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 DYNLT1P63172 113 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 TTC19Q6DKK2 380 aaPredicted RBP12.72□□□□□ -0.37
CCDC38-202ENST00000546386 USP6NLQ92738 828 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 CPXM1Q96SM3 734 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 LRRC4CQ9HCJ2 640 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 OGFRQ9NZT2 677 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 KCNG1Q9UIX4 513 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 GTF3C4Q9UKN8 822 aa12.72□□□□□ -0.37
CCDC38-202ENST00000546386 REV3LO60673 3130 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 NCANO14594 1321 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 C17orf102A2RUQ5 167 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 TMEM88BA6NKF7 163 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 F8W810 466 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 SPTLC1O15269 473 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 ASGR1P07306 291 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 PRLRP16471 622 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 RAD23BP54727 409 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 KCNA10Q16322 511 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 SYCP2LQ5T4T6 812 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 DCUN1D2Q6PH85 259 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 MON1BQ7L1V2 547 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.37
CCDC38-202ENST00000546386 KRT222Q8N1A0 295 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 WHAMMQ8TF30 809 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 PWWP2AQ96N64 755 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 MAGEB5Q9BZ81 275 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 CENPHQ9H3R5 247 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 ZWILCHQ9H900 591 aa12.71□□□□□ -0.37
CCDC38-202ENST00000546386 M0QYV0 167 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 B4GALT4O60513 344 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 ATP2C2O75185 946 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 GZMAP12544 262 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 DARSP14868 501 aaKnown RBP12.71□□□□□ -0.38
CCDC38-202ENST00000546386 RFC1P35251 1148 aaPredicted RBP12.71□□□□□ -0.38
CCDC38-202ENST00000546386 CPT1AP50416 773 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 PSMC1P62191 440 aaKnown RBP12.71□□□□□ -0.38
CCDC38-202ENST00000546386 TUBB2AQ13885 445 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 PTPN20Q4JDL3 420 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 KCTD16Q68DU8 428 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 TTC27Q6P3X3 843 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 RHOT2Q8IXI1 618 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 SYCE1Q8N0S2 351 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 NETO2Q8NC67 525 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 TUBB2BQ9BVA1 445 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 MIS12Q9H081 205 aa12.71□□□□□ -0.38
CCDC38-202ENST00000546386 BPTFQ12830 3046 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 KIAA0100Q14667 2235 aaKnown RBP12.7□□□□□ -0.38
CCDC38-202ENST00000546386 PMM2O15305 246 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 CA12O43570 354 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 KRT14P02533 472 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 CYP1A2P05177 515 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 GHRP10912 638 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
CCDC38-202ENST00000546386 GGCXP38435 758 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 THPOP40225 353 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 PEX5P50542 639 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 BRD3Q15059 726 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 MMGT1Q8N4V1 131 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 SLC4A11Q8NBS3 891 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 OR6B3Q8NGW1 331 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 AGO3Q9H9G7 860 aaKnown RBP12.7□□□□□ -0.38
CCDC38-202ENST00000546386 R3HDM2Q9Y2K5 976 aaKnown RBP12.7□□□□□ -0.38
CCDC38-202ENST00000546386 SNX24Q9Y343 169 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 A0A0A6YYK5 440 aaPredicted RBP12.7□□□□□ -0.38
CCDC38-202ENST00000546386 BTNL10A8MVZ5 291 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 CYP1A1P04798 512 aaPredicted RBP12.7□□□□□ -0.38
CCDC38-202ENST00000546386 AKR1A1P14550 325 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 CYP3A5P20815 502 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 ADORA2BP29275 332 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 NRLP54845 237 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 MTERF4Q7Z6M4 381 aaKnown RBP12.7□□□□□ -0.38
CCDC38-202ENST00000546386 ERICH1Q86X53 443 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 SCUBE3Q8IX30 993 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 VPS18Q9P253 973 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 INPP5FQ9Y2H2 1132 aa12.7□□□□□ -0.38
CCDC38-202ENST00000546386 ERLIN1O75477 346 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 RARAP10276 462 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 MCF2P10911 925 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CCDC130P13994 396 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 TBXAS1P24557 533 aaPredicted RBP12.69□□□□□ -0.38
CCDC38-202ENST00000546386 MLH1P40692 756 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 YARSP54577 528 aaKnown RBP12.69□□□□□ -0.38
CCDC38-202ENST00000546386 ATP11AP98196 1134 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 DHX9Q08211 1270 aaKnown RBP12.69□□□□□ -0.38
CCDC38-202ENST00000546386 ZNF252P-AS1Q0IIN9 211 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 SLC27A1Q6PCB7 646 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 MAGOHBQ96A72 148 aaKnown RBP12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CAPNS2Q96L46 248 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 INTUQ9ULD6 942 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 FAN1Q9Y2M0 1017 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CDY2AQ9Y6F7 541 aa12.69□□□□□ -0.38
CCDC38-202ENST00000546386 CLDN5O00501 218 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms