RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 OAZ1P54368 228 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SOX10P56693 466 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 BCAR1P56945 870 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TUBB8Q3ZCM7 444 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 RASIP1Q5U651 963 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TDRD10Q5VZ19 366 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SPRYD7Q5W111 196 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 LBX2Q6XYB7 198 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 RIOX2Q8IUF8 465 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SKA1Q96BD8 255 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TIPINQ9BVW5 301 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ZNF212Q9UDV6 495 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 TCHHQ07283 1943 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 LRP5O75197 1615 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 GOLGA8KD6RF30 607 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 KPNA1P52294 538 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 EIF2B5Q13144 721 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 CUL3Q13618 768 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 CDH18Q13634 790 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 KRT31Q15323 416 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 STILQ15468 1287 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SDCCAG3Q96C92 435 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 ZBED3Q96IU2 234 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 BFARQ9NZS9 450 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 DDX20Q9UHI6 824 aaKnown RBP9.04□□□□□ -0.96
CLIP1-218ENST00000545889 SLC25A13Q9UJS0 675 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 MID2Q9UJV3 735 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 DAAM1Q9Y4D1 1078 aa9.04□□□□□ -0.96
CLIP1-218ENST00000545889 MYH7P12883 1935 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 H3BRB1 525 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 NKRFO15226 690 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 ACADMP11310 421 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 MSH2P43246 934 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 CDR2Q01850 454 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 KIZQ2M2Z5 673 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TAF1BQ53T94 588 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 ITPRIPL1Q6GPH6 555 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 MOXD1Q6UVY6 613 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 LZICQ8WZA0 190 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 PABPC5Q96DU9 382 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 HAUS8Q9BT25 410 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TUT1Q9H6E5 874 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 COG4Q9H9E3 785 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 PLEKHA5Q9HAU0 1116 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 KLK14Q9P0G3 267 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 SOCS7O14512 581 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 CYP11B2P19099 503 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 YWHAHQ04917 246 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TWF1Q12792 350 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 IKBKEQ14164 716 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 Q4G0T1 1027 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 IRAK1BP1Q5VVH5 260 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 ANKRD40Q6AI12 368 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 OTOP1Q7RTM1 612 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 VSIG10LQ86VR7 867 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 PNMA5Q96PV4 448 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 CIPCQ9C0C6 399 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 RHBDL2Q9NX52 303 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 MAP10Q9P2G4 905 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 FAM95CA0A1B0GW59 222 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 ARHGAP42A6NI28 874 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 CFAP99D6REC4 459 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 DFFAO00273 331 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 SERPIND1P05546 499 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 MYL4P12829 197 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 EPHB3P54753 998 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 IL1RL1Q01638 556 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 NAALADL2Q58DX5 795 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 HEATR6Q6AI08 1181 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 NECAB2Q7Z6G3 386 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 CDR2LQ86X02 465 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TTC13Q8NBP0 860 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 FAF2Q96CS3 445 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 DRC3Q9H069 523 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 THG1LQ9NWX6 298 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TRPM5Q9NZQ8 1165 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 MAP2K7O14733 419 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TJP3O95049 919 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 LUC7L3O95232 432 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TAF6P49848 677 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 SEC24CP53992 1094 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TPI1P60174 286 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 RPL10AP62906 217 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 FKBP1BP68106 108 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 ANO4Q32M45 955 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 CTXN3Q4LDR2 81 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 CCDC38Q502W7 563 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 C10orf76Q5T2E6 689 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 ENOSF1Q7L5Y1 443 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 TRIM42Q8IWZ5 723 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 DHX40Q8IX18 779 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 RHOT2Q8IXI1 618 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 SCFD1Q8WVM8 642 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 RBM41Q96IZ5 413 aaKnown RBP9.03□□□□□ -0.96
CLIP1-218ENST00000545889 MTMR9Q96QG7 549 aa9.03□□□□□ -0.96
CLIP1-218ENST00000545889 C7orf25Q9BPX7 421 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms