RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
RTN3-214ENST00000545432 TIMM13Q9Y5L4 95 aaPredicted RBP16.04■□□□□ 0.16
RTN3-214ENST00000545432 GIPC1O14908 333 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 LARGE1O95461 756 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 OR52Z1P0C646 297 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 CEACAM1P13688 526 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 DMP1Q13316 513 aaPredicted RBP16.03■□□□□ 0.16
RTN3-214ENST00000545432 RUNX3Q13761 415 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 ANKRD1Q15327 319 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 TCEAL6Q6IPX3 200 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 ZPBP2Q6X784 338 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 C1orf186Q6ZWK4 172 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 SYT13Q7L8C5 426 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 TTC9BQ8N6N2 239 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 TCEAL3Q969E4 200 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 GTF3C6Q969F1 213 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 TSPAN18Q96SJ8 248 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 TCHPQ9BT92 498 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 FBRSL1Q9HCM7 1045 aaKnown RBP16.03■□□□□ 0.16
RTN3-214ENST00000545432 TBX20Q9UMR3 447 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 SLC27A5Q9Y2P5 690 aa16.03■□□□□ 0.16
RTN3-214ENST00000545432 NUP210Q8TEM1 1887 aaPredicted RBP16.03■□□□□ 0.16
RTN3-214ENST00000545432 KIF26AQ9ULI4 1882 aaPredicted RBP16.03■□□□□ 0.16
RTN3-214ENST00000545432 SPEGQ15772 3267 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 CITO14578 2027 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 CCDC169A6NNP5 214 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 C4orf47A7E2U8 309 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 RHOBTB1O94844 696 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 CAVIN2O95810 425 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 CYP11A1P05108 521 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 DRD1P21728 446 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 CDC25CP30307 473 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 TUFMP49411 452 aaKnown RBP16.02■□□□□ 0.16
RTN3-214ENST00000545432 NOVA1P51513 510 aaKnown RBP16.02■□□□□ 0.16
RTN3-214ENST00000545432 ACAP1Q15027 740 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 ME3Q16798 604 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 FBXO43Q4G163 708 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 TMEM150AQ86TG1 271 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 CMTM8Q8IZV2 173 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 TMEM130Q8N3G9 435 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 IGSF22Q8N9C0 903 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 EDEM2Q9BV94 578 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 HAPLN2Q9GZV7 340 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 UBQLN1Q9UMX0 589 aaKnown RBP16.02■□□□□ 0.16
RTN3-214ENST00000545432 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
RTN3-214ENST00000545432 EML5Q05BV3 1969 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 CDX4O14627 284 aaPredicted RBP16.01■□□□□ 0.15
RTN3-214ENST00000545432 HIP1RO75146 1068 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 RNF40O75150 1001 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 F11P03951 625 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 CLTAP09496 248 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 CCT6AP40227 531 aaKnown RBP16.01■□□□□ 0.15
RTN3-214ENST00000545432 NOLC1Q14978 699 aaKnown RBP eCLIP16.01■□□□□ 0.15
RTN3-214ENST00000545432 KARSQ15046 597 aaKnown RBP16.01■□□□□ 0.15
RTN3-214ENST00000545432 DAB2IPQ5VWQ8 1189 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 OVOS1Q6IE37 1185 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 RINT1Q6NUQ1 792 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 USP37Q86T82 979 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 TMEM161BQ8NDZ6 487 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 DRC1Q96MC2 740 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 ADAM33Q9BZ11 813 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
RTN3-214ENST00000545432 LNP1A1A4G5 178 aa16■□□□□ 0.15
RTN3-214ENST00000545432 SRRM3A6NNA2 597 aaPredicted RBP16■□□□□ 0.15
RTN3-214ENST00000545432 FAM189A1O60320 539 aa16■□□□□ 0.15
RTN3-214ENST00000545432 SOAT2O75908 522 aa16■□□□□ 0.15
RTN3-214ENST00000545432 EGFP01133 1207 aa16■□□□□ 0.15
RTN3-214ENST00000545432 ATF6P18850 670 aa16■□□□□ 0.15
RTN3-214ENST00000545432 GUCY2CP25092 1073 aa16■□□□□ 0.15
RTN3-214ENST00000545432 GALK1P51570 392 aa16■□□□□ 0.15
RTN3-214ENST00000545432 LILRA4P59901 499 aa16■□□□□ 0.15
RTN3-214ENST00000545432 CYP4F8P98187 520 aa16■□□□□ 0.15
RTN3-214ENST00000545432 AMPD2Q01433 879 aa16■□□□□ 0.15
RTN3-214ENST00000545432 ZNF252P-AS1Q0IIN9 211 aa16■□□□□ 0.15
RTN3-214ENST00000545432 SMARCB1Q12824 385 aa16■□□□□ 0.15
RTN3-214ENST00000545432 ZNF174Q15697 407 aa16■□□□□ 0.15
RTN3-214ENST00000545432 ELF2Q15723 593 aa16■□□□□ 0.15
RTN3-214ENST00000545432 SEZ6Q53EL9 994 aa16■□□□□ 0.15
RTN3-214ENST00000545432 LRSAM1Q6UWE0 723 aa16■□□□□ 0.15
RTN3-214ENST00000545432 NECAB1Q8N987 351 aa16■□□□□ 0.15
RTN3-214ENST00000545432 OR10T2Q8NGX3 314 aa16■□□□□ 0.15
RTN3-214ENST00000545432 EZH1Q92800 747 aaPredicted RBP16■□□□□ 0.15
RTN3-214ENST00000545432 USP13Q92995 863 aaPredicted RBP16■□□□□ 0.15
RTN3-214ENST00000545432 TIPINQ9BVW5 301 aa16■□□□□ 0.15
RTN3-214ENST00000545432 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
RTN3-214ENST00000545432 POLR3BQ9NW08 1133 aaPredicted RBP16■□□□□ 0.15
RTN3-214ENST00000545432 PCNX2A6NKB5 2137 aa16■□□□□ 0.15
RTN3-214ENST00000545432 E9PMD0 336 aa15.99■□□□□ 0.15
RTN3-214ENST00000545432 SLC16A4O15374 487 aa15.99■□□□□ 0.15
RTN3-214ENST00000545432 CXCL8P10145 99 aa15.99■□□□□ 0.15
RTN3-214ENST00000545432 MAPTP10636 758 aaKnown RBP15.99■□□□□ 0.15
RTN3-214ENST00000545432 HMGA1P17096 107 aaKnown RBP15.99■□□□□ 0.15
RTN3-214ENST00000545432 DDX6P26196 483 aaKnown RBP eCLIP15.99■□□□□ 0.15
RTN3-214ENST00000545432 ANAPC15P60006 121 aa15.99■□□□□ 0.15
RTN3-214ENST00000545432 ZNF268Q14587 947 aaPredicted RBP15.99■□□□□ 0.15
RTN3-214ENST00000545432 SH3PXD2AQ5TCZ1 1133 aa15.99■□□□□ 0.15
RTN3-214ENST00000545432 SPATA1Q5VX52 437 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms