RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 CCDC33Q8N5R6 958 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 ZNF564Q8TBZ8 553 aaPredicted RBP7.64□□□□□ -1.19
CIT-215ENST00000544800 HMGB4Q8WW32 186 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 RABGGTAQ92696 567 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 EXTL1Q92935 676 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 FOXJ1Q92949 421 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 CCDC97Q96F63 343 aaPredicted RBP7.64□□□□□ -1.19
CIT-215ENST00000544800 NIFKQ9BYG3 293 aaKnown RBP7.64□□□□□ -1.19
CIT-215ENST00000544800 KDM4CQ9H3R0 1056 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 CYP4F11Q9HBI6 524 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 ZNF302Q9NR11 478 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 CEP72Q9P209 647 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 INSL5Q9Y5Q6 135 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 BACE2Q9Y5Z0 518 aa7.64□□□□□ -1.19
CIT-215ENST00000544800 A0A1W2PRU2 124 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 TRIM66O15016 1216 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 RNF113AO15541 343 aaKnown RBP7.63□□□□□ -1.19
CIT-215ENST00000544800 PARP1P09874 1014 aaKnown RBP7.63□□□□□ -1.19
CIT-215ENST00000544800 HNRNPLP14866 589 aaKnown RBP eCLIP7.63□□□□□ -1.19
CIT-215ENST00000544800 ATF2P15336 505 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 GJA4P35212 333 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 MLH1P40692 756 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 USP11P51784 963 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 INAVAQ3KP66 663 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 SGO2Q562F6 1265 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 NAIF1Q69YI7 327 aaPredicted RBP7.63□□□□□ -1.19
CIT-215ENST00000544800 SWSAP1Q6NVH7 229 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 DGKHQ86XP1 1220 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 CCDC60Q8IWA6 550 aaPredicted RBP7.63□□□□□ -1.19
CIT-215ENST00000544800 PNMA1Q8ND90 353 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 SMARCC2Q8TAQ2 1214 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 ZFP42Q96MM3 310 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 EBF3Q9H4W6 596 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 CUEDC1Q9NWM3 386 aaPredicted RBP7.63□□□□□ -1.19
CIT-215ENST00000544800 GEMIN8Q9NWZ8 242 aaKnown RBP7.63□□□□□ -1.19
CIT-215ENST00000544800 ANAPC2Q9UJX6 822 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 PLAAQ9Y263 795 aa7.63□□□□□ -1.19
CIT-215ENST00000544800 A0A087WZ62 844 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 ENC1O14682 589 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 PCDHGA12O60330 932 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 SEC24AO95486 1093 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 ZFYP08048 801 aaPredicted RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 CD97P48960 835 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 MRPS21P82921 87 aaKnown RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 NAA30Q147X3 362 aaPredicted RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 DCAF6Q58WW2 860 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 UBXN11Q5T124 520 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 PTRH1Q86Y79 214 aaKnown RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 DCBLD1Q8N8Z6 715 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 SMG8Q8ND04 991 aaKnown RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 RHPN1Q8TCX5 695 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 PIGOQ8TEQ8 1089 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 HASPINQ8TF76 798 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 ARHGAP45Q92619 1136 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 CUL5Q93034 780 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 GPATCH3Q96I76 525 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 MMS19Q96T76 1030 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 FDXACB1Q9BRP7 624 aaPredicted RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 POLR3CQ9BUI4 534 aaPredicted RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 LY9Q9HBG7 655 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 KCNH7Q9NS40 1196 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 THSD1Q9NS62 852 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 AGPAT5Q9NUQ2 364 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 TSR3Q9UJK0 312 aaKnown RBP7.62□□□□□ -1.19
CIT-215ENST00000544800 CLCA2Q9UQC9 943 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 GIT1Q9Y2X7 761 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 NFE2L3Q9Y4A8 694 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 PTPRDP23468 1912 aa7.62□□□□□ -1.19
CIT-215ENST00000544800 PLXND1Q9Y4D7 1925 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 IGHV1OR15-9A0A0B4J2B8 117 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 C3orf80F5H4A9 247 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 K7EQS6 105 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 ZNF217O75362 1048 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 PRAMEF12O95522 483 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 DDAH2O95865 285 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 FGFR3P22607 806 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 MAOBP27338 520 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 SEC13P55735 322 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 BNC1Q01954 994 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 ROR1Q01973 937 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 HSF5Q4G112 596 aaPredicted RBP7.61□□□□□ -1.19
CIT-215ENST00000544800 HSP90AB4PQ58FF6 505 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 STXBP5Q5T5C0 1151 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 TRIM68Q6AZZ1 485 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 SLC8B1Q6J4K2 584 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 MIS18BP1Q6P0N0 1132 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 ANKS3Q6ZW76 656 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 USP53Q70EK8 1073 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 TRMT1LQ7Z2T5 733 aaKnown RBP7.61□□□□□ -1.19
CIT-215ENST00000544800 ZNF410Q86VK4 478 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 PACS2Q86VP3 889 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 SLC34A3Q8N130 599 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 DNASE2BQ8WZ79 361 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 MIB2Q96AX9 1013 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 VCPIP1Q96JH7 1222 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 CCNL2Q96S94 520 aaPredicted RBP7.61□□□□□ -1.19
CIT-215ENST00000544800 DONSONQ9NYP3 566 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 EXOC6BQ9Y2D4 811 aa7.61□□□□□ -1.19
CIT-215ENST00000544800 MAFBQ9Y5Q3 323 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms