RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CTNNBL1Q8WYA6 563 aaPredicted RBP32.43■■■□□ 2.78
CCM2-219ENST00000544363 ZSWIM1Q9BR11 485 aa32.43■■■□□ 2.78
CCM2-219ENST00000544363 CACNG4Q9UBN1 327 aa32.43■■■□□ 2.78
CCM2-219ENST00000544363 FANCGO15287 622 aa32.42■■■□□ 2.78
CCM2-219ENST00000544363 CFHP08603 1231 aa32.42■■■□□ 2.78
CCM2-219ENST00000544363 CASQ1P31415 396 aa32.42■■■□□ 2.78
CCM2-219ENST00000544363 TFAP2BQ92481 460 aa32.42■■■□□ 2.78
CCM2-219ENST00000544363 DDX27Q96GQ7 796 aaKnown RBP32.42■■■□□ 2.78
CCM2-219ENST00000544363 NT5C1AQ9BXI3 368 aa32.42■■■□□ 2.78
CCM2-219ENST00000544363 TDRD15B5MCY1 1934 aaKnown RBP32.42■■■□□ 2.78
CCM2-219ENST00000544363 A0A0A6YYK5 440 aaPredicted RBP32.41■■■□□ 2.78
CCM2-219ENST00000544363 CASTOR2A6NHX0 329 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 TACC1O75410 805 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 MOCS3O95396 460 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 CD19P15391 556 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 ABCB4P21439 1286 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 TUSC3Q13454 348 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 UPP1Q16831 310 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 CYFIP2Q96F07 1278 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 NOX5Q96PH1 765 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 PCDHGC3Q9UN70 934 aa32.41■■■□□ 2.78
CCM2-219ENST00000544363 HUS1O60921 280 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 ORC1Q13415 861 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 NOMO2Q5JPE7 1267 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 DPH6Q7L8W6 267 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 DEFB128Q7Z7B8 93 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 TOP6BLQ8N6T0 577 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 APPL2Q8NEU8 664 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 URGCPQ8TCY9 931 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 PCDHB7Q9Y5E2 793 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 MED7O43513 233 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 BUB1O43683 1085 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 FGFR1P11362 822 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 UNC93AQ86WB7 457 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 TRIM58Q8NG06 486 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 UROC1Q96N76 676 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 THAP2Q9H0W7 228 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 L1RE1Q9UN81 338 aa32.4■■■□□ 2.78
CCM2-219ENST00000544363 NCANO14594 1321 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 FAM170AA1A519 330 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 SSTR3P32745 418 aaPredicted RBP32.39■■■□□ 2.78
CCM2-219ENST00000544363 RFC2P35250 354 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 NAP1L1P55209 391 aaKnown RBP32.39■■■□□ 2.78
CCM2-219ENST00000544363 CENPCQ03188 943 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 PASD1Q8IV76 773 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 KBTBD7Q8WVZ9 684 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 HEXIM2Q96MH2 286 aaKnown RBP32.39■■■□□ 2.78
CCM2-219ENST00000544363 KANSL3Q9P2N6 904 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 KIAA1257Q9ULG3 409 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 CAPN6Q9Y6Q1 641 aa32.39■■■□□ 2.78
CCM2-219ENST00000544363 FAM163BP0C2L3 166 aa32.38■■■□□ 2.77
CCM2-219ENST00000544363 VDRP11473 427 aa32.38■■■□□ 2.77
CCM2-219ENST00000544363 IGFBP6P24592 240 aaPredicted RBP32.38■■■□□ 2.77
CCM2-219ENST00000544363 NOMO3P69849 1222 aa32.38■■■□□ 2.77
CCM2-219ENST00000544363 NAA35Q5VZE5 725 aa32.38■■■□□ 2.77
CCM2-219ENST00000544363 OR6B3Q8NGW1 331 aa32.38■■■□□ 2.77
CCM2-219ENST00000544363 CPA5Q8WXQ8 436 aa32.38■■■□□ 2.77
CCM2-219ENST00000544363 PAAF1Q9BRP4 392 aa32.38■■■□□ 2.77
CCM2-219ENST00000544363 LOC101059915A0A1B0GWI6 518 aaPredicted RBP32.37■■■□□ 2.77
CCM2-219ENST00000544363 CYB561D2O14569 222 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 LSM8O95777 96 aaKnown RBP32.37■■■□□ 2.77
CCM2-219ENST00000544363 GPC5P78333 572 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 PPP1R2P3Q6NXS1 205 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 C3orf58Q8NDZ4 430 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 RFFLQ8WZ73 363 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 ARHGEF26Q96DR7 871 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 NSFP46459 744 aaKnown RBP32.37■■■□□ 2.77
CCM2-219ENST00000544363 SENP8Q96LD8 212 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 ALS2CR12Q96Q35 445 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 LRFN2Q9ULH4 789 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 NME7Q9Y5B8 376 aa32.37■■■□□ 2.77
CCM2-219ENST00000544363 GNL1P36915 607 aaPredicted RBP32.36■■■□□ 2.77
CCM2-219ENST00000544363 AARSP49588 968 aaKnown RBP eCLIP32.36■■■□□ 2.77
CCM2-219ENST00000544363 IFI16Q16666 785 aaKnown RBP32.36■■■□□ 2.77
CCM2-219ENST00000544363 SGO2Q562F6 1265 aa32.36■■■□□ 2.77
CCM2-219ENST00000544363 CNKSR3Q6P9H4 555 aa32.36■■■□□ 2.77
CCM2-219ENST00000544363 ADGRF2Q8IZF7 708 aa32.36■■■□□ 2.77
CCM2-219ENST00000544363 PDCL2Q8N4E4 241 aa32.36■■■□□ 2.77
CCM2-219ENST00000544363 RABGGTAQ92696 567 aa32.36■■■□□ 2.77
CCM2-219ENST00000544363 SNX25Q9H3E2 840 aa32.36■■■□□ 2.77
CCM2-219ENST00000544363 CTAGE9A4FU28 777 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 A8MXQ7 604 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 KIAA0355O15063 1070 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 TIMP1P01033 207 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 WARSP23381 471 aaKnown RBP32.35■■■□□ 2.77
CCM2-219ENST00000544363 PAX3P23760 479 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 NOP2P46087 812 aaKnown RBP32.35■■■□□ 2.77
CCM2-219ENST00000544363 DSC1Q08554 894 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 CNGA2Q16280 664 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 MCOLN2Q8IZK6 566 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 CRIPAKQ8N1N5 446 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 SLC35G2Q8TBE7 412 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 ZNF518BQ9C0D4 1074 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 TBC1D13Q9NVG8 400 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 RNF216Q9NWF9 866 aaPredicted RBP32.35■■■□□ 2.77
CCM2-219ENST00000544363 TTC3P53804 2025 aa32.35■■■□□ 2.77
CCM2-219ENST00000544363 TRIM43BA6NCK2 446 aa32.34■■■□□ 2.77
CCM2-219ENST00000544363 CDH5P33151 784 aaPredicted RBP32.34■■■□□ 2.77
CCM2-219ENST00000544363 RHOT2Q8IXI1 618 aa32.34■■■□□ 2.77
CCM2-219ENST00000544363 ABI1Q8IZP0 508 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms