RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 ANKRD13AQ8IZ07 590 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 ZBTB10Q96DT7 871 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 PCDHGC3Q9UN70 934 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 KCNH4Q9UQ05 1017 aa19.09■□□□□ 0.65
VIM-209ENST00000544301 INO80B-WBP1J3KQ70 363 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 TNNC2P02585 160 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 CDH5P33151 784 aaPredicted RBP19.08■□□□□ 0.64
VIM-209ENST00000544301 CETN2P41208 172 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 OSTNP61366 133 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 OGDHQ02218 1023 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 MOGSQ13724 837 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 TFDP1Q14186 410 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 PPP1R15BQ5SWA1 713 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 C6orf89Q6UWU4 347 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 ZNF365Q70YC5 407 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 OTUD6BQ8N6M0 293 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 CEP120Q8N960 986 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 ATXN2LQ8WWM7 1075 aaKnown RBP19.08■□□□□ 0.64
VIM-209ENST00000544301 RBM41Q96IZ5 413 aaKnown RBP19.08■□□□□ 0.64
VIM-209ENST00000544301 SLITRK1Q96PX8 696 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 INO80BQ9C086 356 aaPredicted RBP19.08■□□□□ 0.64
VIM-209ENST00000544301 SMARCAD1Q9H4L7 1026 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 IVNS1ABPQ9Y6Y0 642 aa19.08■□□□□ 0.64
VIM-209ENST00000544301 F8VP50 259 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 SBF1O95248 1867 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 TTC4O95801 387 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 CPP00450 1065 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 DRD4P21917 467 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 EIF4BP23588 611 aaKnown RBP19.07■□□□□ 0.64
VIM-209ENST00000544301 SLC26A2P50443 739 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 LRRC38Q5VT99 294 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 EFCAB12Q6NXP0 572 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 DCUN1D2Q6PH85 259 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 CDR2LQ86X02 465 aaPredicted RBP19.07■□□□□ 0.64
VIM-209ENST00000544301 CCDC89Q8N998 374 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 ANKRD36BP1Q96IX9 119 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 DNAJC17Q9NVM6 304 aaKnown RBP19.07■□□□□ 0.64
VIM-209ENST00000544301 HBP1O60381 514 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 KRT1P04264 644 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 TXNP10599 105 aaKnown RBP19.07■□□□□ 0.64
VIM-209ENST00000544301 KRT10P13645 584 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 KLRC2P26717 231 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 CLCN3P51790 818 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 MBTD1Q05BQ5 628 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 LONRF1Q17RB8 773 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 KAZNQ674X7 775 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 MFSD7Q6UXD7 560 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 ERICH1Q86X53 443 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 MICALL1Q8N3F8 863 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 PWWP2AQ96N64 755 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 MINDY3Q9H8M7 445 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
VIM-209ENST00000544301 TAP1Q03518 808 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 IFT88Q13099 833 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 PPIL2Q13356 520 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 KYNUQ16719 465 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 TMEM132AQ24JP5 1023 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 IZUMO3Q5VZ72 239 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 ARMC9Q7Z3E5 817 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 TMEM192Q8IY95 271 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 BBOF1Q8ND07 529 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 CHMP6Q96FZ7 201 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 SEC16BQ96JE7 1060 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 SERPINB12Q96P63 405 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 CDT1Q9H211 546 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 PDGFCQ9NRA1 345 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 LIASO43766 372 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 SLC20A2Q08357 652 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 PIGHQ14442 188 aaPredicted RBP19.06■□□□□ 0.64
VIM-209ENST00000544301 ZFYVE27Q5T4F4 411 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 CYP4A22Q5TCH4 519 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 WDR78Q5VTH9 848 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 SMYD5Q6GMV2 418 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 DENND1BQ6P3S1 775 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 GSTA5Q7RTV2 222 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 PRUNE1Q86TP1 453 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 EXOC3L1Q86VI1 746 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 NINJ2Q9NZG7 142 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 NXF1Q9UBU9 619 aaKnown RBP19.06■□□□□ 0.64
VIM-209ENST00000544301 TNFSF13BQ9Y275 285 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 CEP83Q9Y592 693 aa19.06■□□□□ 0.64
VIM-209ENST00000544301 ANK1P16157 1881 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 MCM3APO60318 1980 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 TJP3O95049 919 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 IQCF3P0C7M6 154 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 CXCL8P10145 99 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 OSBPP22059 807 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 YWHAEP62258 255 aaKnown RBP19.05■□□□□ 0.64
VIM-209ENST00000544301 LMNB2Q03252 620 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 CCDC38Q502W7 563 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 TXNRD3NBQ6F5E7 133 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 SPOCD1Q6ZMY3 1216 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 TAOK1Q7L7X3 1001 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 CPLX4Q7Z7G2 160 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 NIPA2Q8N8Q9 360 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 IPO4Q8TEX9 1081 aaKnown RBP19.05■□□□□ 0.64
VIM-209ENST00000544301 ZNF317Q96PQ6 595 aaPredicted RBP19.05■□□□□ 0.64
VIM-209ENST00000544301 RNPEPQ9H4A4 650 aa19.05■□□□□ 0.64
VIM-209ENST00000544301 RPF1Q9H9Y2 349 aaKnown RBP19.05■□□□□ 0.64
VIM-209ENST00000544301 SRCAPQ6ZRS2 3230 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms