RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 RUSC1Q9BVN2 902 aa10.34□□□□□ -0.75
C2CD3-220ENST00000544293 SLITRK6Q9H5Y7 841 aa10.34□□□□□ -0.75
C2CD3-220ENST00000544293 TASP1Q9H6P5 420 aa10.34□□□□□ -0.75
C2CD3-220ENST00000544293 TOPORSQ9NS56 1045 aaPredicted RBP10.34□□□□□ -0.75
C2CD3-220ENST00000544293 GKN1Q9NS71 199 aa10.34□□□□□ -0.75
C2CD3-220ENST00000544293 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
C2CD3-220ENST00000544293 KIAA1024Q9UPX6 916 aa10.34□□□□□ -0.75
C2CD3-220ENST00000544293 CCL26Q9Y258 94 aa10.34□□□□□ -0.75
C2CD3-220ENST00000544293 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
C2CD3-220ENST00000544293 TTC26A0AVF1 554 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 CCDC169A6NNP5 214 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 FAM189A1O60320 539 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 HIP1RO75146 1068 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 AKAP3O75969 853 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 ADRB2P07550 413 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 ATF6P18850 670 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 MUTP22033 750 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 TNFSF9P41273 254 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 RNF43Q68DV7 783 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 RINT1Q6NUQ1 792 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 LRRTM3Q86VH5 581 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 WASF1Q92558 559 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 GTF3C6Q969F1 213 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 MRPL4Q9BYD3 311 aaKnown RBP10.33□□□□□ -0.76
C2CD3-220ENST00000544293 VPS45Q9NRW7 570 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
C2CD3-220ENST00000544293 LNP1A1A4G5 178 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 BCLAF3A2AJT9 711 aaKnown RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 OR6C75A6NL08 312 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 LACTBL1A8MY62 500 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 TAF4O00268 1085 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 SLC16A4O15374 487 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 RNF40O75150 1001 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 CAPNS1P04632 268 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 OR52Z1P0C646 297 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 CXCL8P10145 99 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 HARSP12081 509 aaKnown RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 ARSAP15289 507 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 HMGA1P17096 107 aaKnown RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 TYMPP19971 482 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 U2AF2P26368 475 aaKnown RBP eCLIP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 MARCKSP29966 332 aaPredicted RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 NOVA1P51513 510 aaKnown RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 EPHB3P54753 998 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 GUCY1B3Q02153 619 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 MCL1Q07820 350 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 RUNX3Q13761 415 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 MYBPC2Q14324 1141 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 NBR1Q14596 966 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 ITPRIPL2Q3MIP1 535 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 CAMKK1Q8N5S9 505 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 TMEM161BQ8NDZ6 487 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 USP13Q92995 863 aaPredicted RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 HHIPQ96QV1 700 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 TCHPQ9BT92 498 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 MMTAG2Q9BU76 263 aaKnown RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 EBF3Q9H4W6 596 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 DDX19AQ9NUU7 478 aaKnown RBP10.32□□□□□ -0.76
C2CD3-220ENST00000544293 TBX20Q9UMR3 447 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 ASB3Q9Y575 518 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
C2CD3-220ENST00000544293 SRRM3A6NNA2 597 aaPredicted RBP10.31□□□□□ -0.76
C2CD3-220ENST00000544293 PP2D1A8MPX8 630 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 PATE3B3GLJ2 98 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 TOM1L1O75674 476 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 F11P03951 625 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 CCDC192P0DO97 292 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
C2CD3-220ENST00000544293 CYP3A5P20815 502 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 CDC25AP30304 524 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 CCT6AP40227 531 aaKnown RBP10.31□□□□□ -0.76
C2CD3-220ENST00000544293 ALDH1A3P47895 512 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 TOB1P50616 345 aaPredicted RBP10.31□□□□□ -0.76
C2CD3-220ENST00000544293 LILRA4P59901 499 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 FOXC1Q12948 553 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 PLD1Q13393 1074 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 SH3PXD2AQ5TCZ1 1133 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 SCARA3Q6AZY7 606 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 CMTM8Q8IZV2 173 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 IGSF22Q8N9C0 903 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 OXCT2Q9BYC2 517 aaPredicted RBP10.31□□□□□ -0.76
C2CD3-220ENST00000544293 PLEKHA5Q9HAU0 1116 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 BRMS1Q9HCU9 246 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 KMT5AQ9NQR1 393 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 HSFX1Q9UBD0 423 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 EBF1Q9UH73 591 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 INVSQ9Y283 1065 aa10.31□□□□□ -0.76
C2CD3-220ENST00000544293 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
C2CD3-220ENST00000544293 PIRO00625 290 aa10.3□□□□□ -0.76
C2CD3-220ENST00000544293 DPYSL4O14531 572 aa10.3□□□□□ -0.76
C2CD3-220ENST00000544293 CAVIN2O95810 425 aa10.3□□□□□ -0.76
C2CD3-220ENST00000544293 HNRNPLP14866 589 aaKnown RBP eCLIP10.3□□□□□ -0.76
C2CD3-220ENST00000544293 NMT1P30419 496 aaKnown RBP10.3□□□□□ -0.76
C2CD3-220ENST00000544293 MCM2P49736 904 aa10.3□□□□□ -0.76
C2CD3-220ENST00000544293 IRX4P78413 519 aa10.3□□□□□ -0.76
C2CD3-220ENST00000544293 RING1Q06587 406 aa10.3□□□□□ -0.76
C2CD3-220ENST00000544293 GRSF1Q12849 480 aaKnown RBP eCLIP10.3□□□□□ -0.76
C2CD3-220ENST00000544293 PDIA5Q14554 519 aa10.3□□□□□ -0.76
C2CD3-220ENST00000544293 ENOX2Q16206 610 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms