RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 CD302Q8IX05 232 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 HPDLQ96IR7 371 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 GCOM2Q9BZD3 368 aaPredicted RBP18.1■□□□□ 0.49
PTPRO-209ENST00000543886 LRRC19Q9H756 370 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 SMYD3Q9H7B4 428 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 CYP3A43Q9HB55 503 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 ITGA11Q9UKX5 1188 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 SNX24Q9Y343 169 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 C2CD2Q9Y426 696 aa18.1■□□□□ 0.49
PTPRO-209ENST00000543886 NRCAMQ92823 1304 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 PASKQ96RG2 1323 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 TMEM191CA6NGB0 347 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 F2P00734 622 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 KRT14P02533 472 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 FGFR4P22455 802 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 GJC1P36383 396 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 ZNF157P51786 506 aaPredicted RBP18.09■□□□□ 0.49
PTPRO-209ENST00000543886 RAD23BP54727 409 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 TAS2R40P59535 323 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 TMEM62Q0P6H9 643 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 IRF5Q13568 498 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 DENND1BQ6P3S1 775 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 LRIG3Q6UXM1 1119 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 TLK2Q86UE8 772 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 NT5DC4Q86YG4 428 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 KATNAL2Q8IYT4 538 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 UBLCP1Q8WVY7 318 aaPredicted RBP18.09■□□□□ 0.49
PTPRO-209ENST00000543886 MCEEQ96PE7 176 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 SDCBP2Q9H190 292 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 VRTNQ9H8Y1 702 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 PARP2Q9UGN5 583 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 STRIP2Q9ULQ0 834 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 AGAP1Q9UPQ3 857 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 GNEQ9Y223 722 aaKnown RBP18.09■□□□□ 0.49
PTPRO-209ENST00000543886 PTPN22Q9Y2R2 807 aa18.09■□□□□ 0.49
PTPRO-209ENST00000543886 MANSC4A6NHS7 340 aaPredicted RBP18.08■□□□□ 0.49
PTPRO-209ENST00000543886 IGF2BP3O00425 579 aaKnown RBP eCLIP18.08■□□□□ 0.49
PTPRO-209ENST00000543886 ECEL1O95672 775 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 FLT3P36888 993 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 GRM5P41594 1212 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 RPL7AP62424 266 aaKnown RBP18.08■□□□□ 0.49
PTPRO-209ENST00000543886 DHX9Q08211 1270 aaKnown RBP18.08■□□□□ 0.49
PTPRO-209ENST00000543886 RASAL3Q86YV0 1011 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 WDTC1Q8N5D0 677 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 CXorf38Q8TB03 319 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 LHX5Q9H2C1 402 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 ADAMTS10Q9H324 1103 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 DPP3Q9NY33 737 aa18.08■□□□□ 0.49
PTPRO-209ENST00000543886 GOLGA6L10A6NI86 522 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 NPTXRO95502 500 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 CAPN2P17655 700 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 RBP5P82980 135 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 PPP1R7Q15435 360 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 TTMPQ5BVD1 217 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 CATSPER4Q7RTX7 472 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 C1orf54Q8WWF1 131 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 ARL8AQ96BM9 186 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 KIF12Q96FN5 646 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 ZDHHC18Q9NUE0 388 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 CITO14578 2027 aa18.08■□□□□ 0.48
PTPRO-209ENST00000543886 TCRBV5S1A1TA0A578 114 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 CETN2P41208 172 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 RPL21P46778 160 aaKnown RBP18.07■□□□□ 0.48
PTPRO-209ENST00000543886 PLTPP55058 493 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 MFSD10Q14728 455 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 UAP1Q16222 522 aaPredicted RBP18.07■□□□□ 0.48
PTPRO-209ENST00000543886 CEP85LQ5SZL2 805 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 CYP4A22Q5TCH4 519 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 OLFML2BQ68BL8 750 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 C3orf20Q8ND61 904 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 EXD1Q8NHP7 514 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 FLRT1Q9NZU1 646 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 O00370 1275 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 CILPO75339 1184 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 RALAP11233 206 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 CYP2C9P11712 490 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 KCNJ1P48048 391 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
PTPRO-209ENST00000543886 ORC1Q13415 861 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 SNX1Q13596 522 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 ZFYVE27Q5T4F4 411 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 SLC4A11Q8NBS3 891 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 LENG1Q96BZ8 264 aaPredicted RBP18.07■□□□□ 0.48
PTPRO-209ENST00000543886 TMEM176AQ96HP8 235 aa18.07■□□□□ 0.48
PTPRO-209ENST00000543886 SMIM35A0A1B0GVV1 85 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 PPFIA2O75334 1257 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 GPR32O75388 356 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 ZNF865P0CJ78 1059 aaPredicted RBP18.06■□□□□ 0.48
PTPRO-209ENST00000543886 PIGHQ14442 188 aaPredicted RBP18.06■□□□□ 0.48
PTPRO-209ENST00000543886 SLC27A1Q6PCB7 646 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 KAT2BQ92831 832 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 SLCO2A1Q92959 643 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 ELOVL4Q9GZR5 314 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 SYNCQ9H7C4 482 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 PLEKHA5Q9HAU0 1116 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 HOMER3Q9NSC5 361 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 GRHL1Q9NZI5 618 aa18.06■□□□□ 0.48
PTPRO-209ENST00000543886 MTRF1LQ9UGC7 380 aaKnown RBP18.06■□□□□ 0.48
PTPRO-209ENST00000543886 HMGXB4Q9UGU5 601 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms